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Aliases for LINC01725 Gene
Subcategory (RNA class) for LINC01725 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LINC01725 Gene
External Ids for LINC01725 Gene
- HGNC: 52513
- Entrez Gene: 101927587
- Ensembl: ENSG00000233008
Previous GeneCards Identifiers for LINC01725 Gene
- GC01M083577
Summaries for LINC01725 Gene
GeneCards Summary for LINC01725 Gene
LINC01725 (Long Intergenic Non-Protein Coding RNA 1725) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LINC01725 Gene
- Monarch Initiative
- Search for LINC01725 at DataMed
- Search for LINC01725 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01725 Gene
Genomics for LINC01725 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LINC01725 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC01725 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LINC01725 Gene
Genomic Locations for LINC01725 Gene
- chr1:83,348,364-83,861,023
- (GRCh38/hg38)
- Size:
- 512,660 bases
- Orientation:
- Minus strand
- chr1:84,041,459-84,326,706
- (GRCh37/hg19)
- Size:
- 285,248 bases
- Orientation:
- Minus strand
Genomic View for LINC01725 Gene
Genes around LINC01725 on UCSC Golden Path with GeneCards custom track
LINC01725 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 1p31.1 by HGNC
- 1p31.1 by Entrez Gene
- 1p31.1 by Ensembl
LINC01725 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC01725 Gene
Proteins for LINC01725 Gene
Post-translational modifications for LINC01725 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC01725
- Origene Custom Protein Services for LINC01725
No data available for DME Specific Peptides for LINC01725 Gene
Domains & Families for LINC01725 Gene
Gene Families for LINC01725 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01725 Gene
Function for LINC01725 Gene
Phenotypes From GWAS Catalog for LINC01725 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LINC01725
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01725 Gene
Localization for LINC01725 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01725 Gene
Transcripts for LINC01725 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01725 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS000057EC58_9606 | lncRNA | 1991 | 4 |
RefSeq: NR_119374, Ensembl: ENST00000457273 (view in UCSC) , LNCipedia: LINC01725:44, NONCODE: NONHSAT004171.2, |
| URS000042F3C5_9606 | lncRNA | 400 | 4 |
Ensembl: ENST00000419733 (view in UCSC) , LncBook: HSALNT0009658, LNCipedia: LINC01725:31, NONCODE: NONHSAT004174.2, |
| URS00002F2DED_9606 | lncRNA | 3177 | 3 |
Ensembl: ENST00000417975 (view in UCSC) , LNCipedia: LINC01725:40, NONCODE: NONHSAT004161.2, |
| URS00007599AD_9606 | lncRNA | 3166 | 3 |
HGNC: 52513, RefSeq: NR_119375, LNCipedia: LINC01725:16, |
| URS00002670A3_9606 | lncRNA | 471 | 3 |
Ensembl: ENST00000417565 (view in UCSC) , LNCipedia: LINC01725:43, NONCODE: NONHSAT004173.2, |
LINC01725 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LINC01725 Gene
- 1 NCBI additional mRNA sequence :
CRISPR Products
- Browse CRISPR knockouts for LINC01725
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LINC01725 Gene
- GeneLoc Exon Structure for
- LINC01725
Expression for LINC01725 Gene
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01725
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01725 Gene
Orthologs for LINC01725 Gene
No data available for Orthologs for LINC01725 Gene
Paralogs for LINC01725 Gene
No data available for Paralogs for LINC01725 Gene
Variants for LINC01725 Gene
Additional Variant Information for LINC01725 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC01725
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01725 Gene
Disorders for LINC01725 Gene
Additional Disease Information for LINC01725
No disorders were found for LINC01725 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01725 Gene
Publications for LINC01725 Gene
- Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3
- Genome-wide scan of copy number variation in late-onset Alzheimer's disease. (PMID: 20061627) Heinzen EL … Goldstein DB (Journal of Alzheimer's disease : JAD 2010) 3
- Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 3
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3
Products for LINC01725 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC01725
- Origene Custom Protein Services for LINC01725
- Browse OriGene Inhibitory RNA Products For LINC01725
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC01725
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC01725
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC01725
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC01725
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC01725
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC01725
Sources for LINC01725 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB