Aliases for LINC01714 Gene

Data sources for LINC01714 Gene:

RNA type for LINC01714 Gene

lncRNA

Aliases for LINC01714 Gene

External Ids for LINC01714 Gene

Summaries for LINC01714 Gene

GeneCards Summary for LINC01714 Gene

LINC01714 (Long Intergenic Non-Protein Coding RNA 1714) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01714 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01714 Gene

Genomics for LINC01714 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01714 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J008199 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 +2.1 2068 8.2 ZNF592 CEBPA POLR2A YY1 CEBPB FOXA1 KLF11 HOMEZ EP300 THAP11 HSALNG0000618 LINC01714 ERRFI1 ENSG00000238290 SLC45A1 RF00003-002 RNU1-7P
GH01J008002 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 10.6 -196.4 -196407 4.3 MYC IKZF1 NCOR1 ZNF600 SSRP1 JUND ZNF223 ZNF10 ZSCAN16 NFIC ENSG00000238290 PARK7 ERRFI1 SLC45A1 LINC01714 RNU1-7P TNFRSF9 UTS2 PER3 lnc-ERRFI1-1
GH01J007223 Enhancer 0.8 Ensembl ENCODE 5.1 -977.4 -977367 1.6 ZNF217 CTBP1 RAD21 MAFK JUND CTCF NCOA3 BHLHE40 POLR2A ZEB2 ENSG00000237365 CAMTA1-AS1 LINC01714 RF00003-001 RNU1-8P HSALNG0000557 CAMTA1 VAMP3
GH01J007246 Enhancer 0.6 Ensembl dbSUPER 6.2 -953.3 -953267 1 ZIC2 POLR2A CREB1 RNU1-8P ENSG00000237365 LINC01714 LOC105376692 HSALNG0000558 CAMTA1 VAMP3
GH01J007255 Enhancer 0.4 Ensembl dbSUPER 4.8 -945.7 -945667 0.6 GABPA RNU1-8P CAMTA1-AS1 LINC01714 LOC105376692 HSALNG0000558 CAMTA1 VAMP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01714 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01714 Gene

Latest Assembly
chr1:8,201,368-8,215,211
(GRCh38/hg38)
Size:
13,844 bases
Orientation:
Plus strand

Previous Assembly
chr1:8,268,732-8,275,270
(GRCh37/hg19 by Entrez Gene)
Size:
6,539 bases
Orientation:
Plus strand

chr1:8,268,732-8,275,270
(GRCh37/hg19 by Ensembl)
Size:
6,539 bases
Orientation:
Plus strand

Genomic View for LINC01714 Gene

Genes around LINC01714 on UCSC Golden Path with GeneCards custom track
LINC01714 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01714 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01714 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01714 Gene

Proteins for LINC01714 Gene

Post-translational modifications for LINC01714 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01714 Gene

Domains & Families for LINC01714 Gene

Gene Families for LINC01714 Gene

genes like me logo Genes that share domains with LINC01714: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01714 Gene

Function for LINC01714 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01714 Gene

Localization for LINC01714 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01714 Gene

Pathways & Interactions for LINC01714 Gene

PathCards logo

SuperPathways for LINC01714 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01714 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01714 Gene

Drugs & Compounds for LINC01714 Gene

No Compound Related Data Available

Transcripts for LINC01714 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01714 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000394A79_9606 lncRNA 501 5

RefSeq: NR_125998,

Ensembl: ENST00000452982 (view in UCSC) ,

LncBook: HSALNT0001304,

LNCipedia: LINC01714:36,

NONCODE: NONHSAT000740.2,

URS00009C6068_9606 lncRNA 900 3

Ensembl: ENST00000635451 (view in UCSC) ,

LncBook: HSALNT0001302,

LNCipedia: LINC01714:35,

URS0000EF3B2E_9606 lncRNA 683 1

Ensembl: ENST00000670361 (view in UCSC) ,

URS00009C5903_9606 lncRNA 2220 2

LncBook: HSALNT0001261,

NONCODE: NONHSAT148319.1,

URS0000D5E135_9606 lncRNA 1693 2

LncBook: HSALNT0001292,

LNCipedia: LINC01714:31,

LINC01714 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01714 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01714 Gene

No ASD Table

Relevant External Links for LINC01714 Gene

GeneLoc Exon Structure for
LINC01714

Expression for LINC01714 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01714 Gene

Orthologs for LINC01714 Gene

Evolution for LINC01714 Gene

ENSEMBL:
Gene Tree for LINC01714 (if available)
TreeFam:
Gene Tree for LINC01714 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC01714

No data available for Orthologs for LINC01714 Gene

Paralogs for LINC01714 Gene

No data available for Paralogs for LINC01714 Gene

Variants for LINC01714 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01714 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01714 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01714
Leiden Open Variation Database (LOVD)
LINC01714

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01714 Gene

Disorders for LINC01714 Gene

Additional Disease Information for LINC01714

No disorders were found for LINC01714 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01714 Gene

Publications for LINC01714 Gene

  1. LINC01714 Enhances Gemcitabine Sensitivity by Modulating FOXO3 Phosphorylation in Cholangiocarcinoma. (PMID: 31902744) Shen S … Zhang J (Molecular therapy. Nucleic acids 2020) 2 3
  2. Genome-wide association study of plasma N6 polyunsaturated fatty acids within the cohorts for heart and aging research in genomic epidemiology consortium. (PMID: 24823311) Guan W … Steffen LM (Circulation. Cardiovascular genetics 2014) 3

No data available for Mastermind for LINC01714 Gene

Products for LINC01714 Gene

Sources for LINC01714 Gene