Aliases for LINC01702 Gene

Subcategory (RNA class) for LINC01702 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01702 Gene

  • Long Intergenic Non-Protein Coding RNA 1702 2 3 5
  • LINC01702 2 5 165
  • NONHSAG001758.2 91
  • HSALNG0004287 164

External Ids for LINC01702 Gene

Summaries for LINC01702 Gene

GeneCards Summary for LINC01702 Gene

LINC01702 (Long Intergenic Non-Protein Coding RNA 1702) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01702 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01702 Gene

Genomics for LINC01702 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01702 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J067521 Promoter/Enhancer 1 EPDnew ENCODE 600.7 +0.3 276 1.1 NFKBIZ SP1 CEBPA SOX13 FOXA2 ATF3 YY1 ZBTB33 KDM6A JUND LINC01702 lnc-SERBP1-1 RNU7-80P GADD45A HSALNG0004288 SERBP1
GH01J067534 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 +13.5 13475 2.2 CEBPG GATAD2A CTCF ATF7 TEAD4 ZNF629 TFE3 RFX1 SOX13 NFKBIZ HSALNG0004288 GADD45A RNU7-80P GNG12 GNG12-AS1 SLC35D1 LINC01702 SERBP1
GH01J067524 Enhancer 0.7 Ensembl 0.7 +3.1 3145 1.2 GATAD2A CTCF SP1 SOX13 ZBTB26 FOXA2 ATF3 YY1 ZBTB33 BCOR RNU7-80P GADD45A LINC01702 HSALNG0004288 SERBP1
GH01J067531 Enhancer 1 Ensembl ENCODE 0.4 +10.9 10940 2.2 GATAD2A CTCF REST TFE3 NFKBIZ RCOR2 FOXA1 RBFOX2 RXRB RAD21 GADD45A RNU7-80P GNG12-AS1 GNG12 HSALNG0004288 LINC01702 SERBP1
GH01J067530 Enhancer 0.2 ENCODE 0.4 +9.1 9097 0.2 GADD45A RNU7-80P GNG12 GNG12-AS1 LINC01702 HSALNG0004288 SERBP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01702 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01702 Gene

Genomic Locations for LINC01702 Gene
chr1:67,521,856-67,534,634
(GRCh38/hg38)
Size:
12,779 bases
Orientation:
Plus strand

Genomic View for LINC01702 Gene

Genes around LINC01702 on UCSC Golden Path with GeneCards custom track
LINC01702 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01702 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01702 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01702 Gene

Proteins for LINC01702 Gene

Post-translational modifications for LINC01702 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01702 Gene

Domains & Families for LINC01702 Gene

Gene Families for LINC01702 Gene

genes like me logo Genes that share domains with LINC01702: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01702 Gene

Function for LINC01702 Gene

Phenotypes From GWAS Catalog for LINC01702 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01702 Gene

Localization for LINC01702 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01702 Gene

Pathways & Interactions for LINC01702 Gene

PathCards logo

SuperPathways for LINC01702 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01702 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01702 Gene

Drugs & Compounds for LINC01702 Gene

No Compound Related Data Available

Transcripts for LINC01702 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01702 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00009C6016_9606 lncRNA 745 4

HGNC: 52490,

Ensembl: ENST00000635350 (view in UCSC) ,

LncBook: HSALNT0008461,

LNCipedia: LINC01702:15,

URS0000EF3D92_9606 lncRNA 524 1

Ensembl: ENST00000230113 (view in UCSC) ,

URS0000EEE157_9606 lncRNA 518 1

Ensembl: ENST00000655752 (view in UCSC) ,

URS0000EF5F83_9606 lncRNA 510 1

Ensembl: ENST00000657338 (view in UCSC) ,

URS0000EEFD89_9606 lncRNA 484 1

Ensembl: ENST00000634424 (view in UCSC) ,

LINC01702 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01702 Gene

No ASD Table

Relevant External Links for LINC01702 Gene

GeneLoc Exon Structure for
LINC01702

No data available for mRNA/cDNA for LINC01702 Gene

Expression for LINC01702 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01702 Gene

Orthologs for LINC01702 Gene

Evolution for LINC01702 Gene

ENSEMBL:
Gene Tree for LINC01702 (if available)
TreeFam:
Gene Tree for LINC01702 (if available)

No data available for Orthologs for LINC01702 Gene

Paralogs for LINC01702 Gene

No data available for Paralogs for LINC01702 Gene

Variants for LINC01702 Gene

Additional dbSNP identifiers (rs#s) for LINC01702 Gene

Additional Variant Information for LINC01702 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01702

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01702 Gene

Disorders for LINC01702 Gene

Additional Disease Information for LINC01702

No disorders were found for LINC01702 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01702 Gene

Publications for LINC01702 Gene

No publications were found for LINC01702 Gene.

No data available for Mastermind for LINC01702 Gene

Products for LINC01702 Gene

Sources for LINC01702 Gene