Aliases for LINC01698 Gene

Subcategory (RNA class) for LINC01698 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01698 Gene

  • Long Intergenic Non-Protein Coding RNA 1698 2 3 5
  • LINC01698 2 168
  • NONHSAG004161 92
  • HSALNG0010195 167

External Ids for LINC01698 Gene

Summaries for LINC01698 Gene

GeneCards Summary for LINC01698 Gene

LINC01698 (Long Intergenic Non-Protein Coding RNA 1698) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01698 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01698 Gene

Genomics for LINC01698 Gene

GeneHancer (GH) Regulatory Elements for LINC01698 Gene

Promoters and enhancers for LINC01698 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J209366 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 504.9 +1.4 1383 5.1 EP300 JUND FOS ZNF316 MAFF FOSL2 MAFK GATA3 STAT3 YY1 LINC01698 LAMB3 MIR205HG MIR205 ENSG00000224260 IRF6 HSD11B1 lnc-CAMK1G-8
GH01J209354 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 5.1 -11.9 -11861 3.6 CTCF POLR2A GABPA RAD21 TRIM22 SMC3 DEK GATA3 FOS WRNIP1 MIR205HG MIR205 ENSG00000224540 ENSG00000224260 LINC01698 IRF6 LAMB3 lnc-CAMK1G-9
GH01J209375 Enhancer 0.9 Ensembl ENCODE dbSUPER 4.7 +8.3 8339 2 CTCF EP300 ATF2 FOS CEBPB JUN ETS1 GATA3 JUND MAX lnc-CAMK1G-8 MIR205HG MIR205 LINC01698 lnc-CAMK1G-7
GH01J209362 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.4 -3361 3.4 FOS STAT3 POLR2A FOXA1 LAMB3 MIR205HG IRF6 MIR205 ENSG00000224260 LINC01698 lnc-CAMK1G-9
GH01J209379 Enhancer 0.6 Ensembl dbSUPER 0.4 +11.7 11739 2.8 JUND GATA3 RFX5 FOXA1 lnc-CAMK1G-7 lnc-CAMK1G-8 LINC01698
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01698 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01698 Gene

Genomic Locations for LINC01698 Gene
chr1:209,367,662-209,380,518
(GRCh38/hg38)
Size:
12,857 bases
Orientation:
Plus strand
chr1:209,541,007-209,553,035
(GRCh37/hg19)
Size:
12,029 bases
Orientation:
Plus strand

Genomic View for LINC01698 Gene

Genes around LINC01698 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01698 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01698 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01698 Gene

Proteins for LINC01698 Gene

Post-translational modifications for LINC01698 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01698 Gene

Domains & Families for LINC01698 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01698 Gene

Function for LINC01698 Gene

Phenotypes From GWAS Catalog for LINC01698 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01698 Gene

Localization for LINC01698 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01698 Gene

Pathways & Interactions for LINC01698 Gene

PathCards logo

SuperPathways for LINC01698 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01698 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01698 Gene

Drugs & Compounds for LINC01698 Gene

No Compound Related Data Available

Transcripts for LINC01698 Gene

mRNA/cDNA for LINC01698 Gene

6 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
2 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01698 Gene

No ASD Table

Relevant External Links for LINC01698 Gene

GeneLoc Exon Structure for
LINC01698

Expression for LINC01698 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01698 Gene

Orthologs for LINC01698 Gene

Evolution for LINC01698 Gene

ENSEMBL:
Gene Tree for LINC01698 (if available)
TreeFam:
Gene Tree for LINC01698 (if available)

No data available for Orthologs for LINC01698 Gene

Paralogs for LINC01698 Gene

No data available for Paralogs for LINC01698 Gene

Variants for LINC01698 Gene

Additional dbSNP identifiers (rs#s) for LINC01698 Gene

Additional Variant Information for LINC01698 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01698

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01698 Gene

Disorders for LINC01698 Gene

Additional Disease Information for LINC01698

No disorders were found for LINC01698 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01698 Gene

Publications for LINC01698 Gene

No publications were found for LINC01698 Gene.

No data available for Mastermind for LINC01698 Gene

Products for LINC01698 Gene

Sources for LINC01698 Gene