Aliases for LINC01696 Gene

Subcategory (RNA class) for LINC01696 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01696 Gene

  • Long Intergenic Non-Protein Coding RNA 1696 2 3 5
  • LINC01696 2 168
  • NONHSAG004160 92
  • HSALNG0010192 167

External Ids for LINC01696 Gene

Previous GeneCards Identifiers for LINC01696 Gene

  • GC01P209327
  • GC01P209328
  • GC01P209329

Summaries for LINC01696 Gene

GeneCards Summary for LINC01696 Gene

LINC01696 (Long Intergenic Non-Protein Coding RNA 1696) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01696 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01696 Gene

Genomics for LINC01696 Gene

GeneHancer (GH) Regulatory Elements for LINC01696 Gene

Promoters and enhancers for LINC01696 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J209291 Enhancer 0.3 Ensembl 500.7 -2.0 -1951 0.6 ETS1 LINC01696 HSALNG0010184 ATP5MC2P1
GH01J209318 Enhancer 0.6 Ensembl ENCODE 0.4 +25.0 24954 1.6 FOS NFE2 PKNOX1 CTCF MIR205HG MIR205 lnc-CAMK1G-9 LINC01696 HSALNG0010184
GH01J209302 Enhancer 0.4 Ensembl 0.4 +9.5 9549 2 FOS RCOR1 EZH2 GATA2 HSALNG0010184 LINC01696 lnc-CAMK1G-9
GH01J209323 Enhancer 0.5 ENCODE 0.3 +30.8 30755 2.8 FOS CEBPB SCRT1 HLF RFX1 SCRT2 MIR205HG MIR205 ENSG00000224540 lnc-CAMK1G-9 HSALNG0010184 LINC01696
GH01J209328 Enhancer 0.3 Ensembl 0.3 +33.2 33249 0.2 EP300 POLR2A MIR205 MIR205HG lnc-CAMK1G-9 HSALNG0010184 LINC01696
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01696 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01696 Gene

Genomic Locations for LINC01696 Gene
chr1:209,294,052-209,328,535
(GRCh38/hg38)
Size:
34,484 bases
Orientation:
Plus strand
chr1:209,498,801-209,501,877
(GRCh37/hg19)
Size:
3,077 bases
Orientation:
Plus strand

Genomic View for LINC01696 Gene

Genes around LINC01696 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01696 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01696 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01696 Gene

Proteins for LINC01696 Gene

Post-translational modifications for LINC01696 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01696 Gene

Domains & Families for LINC01696 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01696 Gene

Function for LINC01696 Gene

Phenotypes From GWAS Catalog for LINC01696 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01696 Gene

Localization for LINC01696 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01696 Gene

Pathways & Interactions for LINC01696 Gene

PathCards logo

SuperPathways for LINC01696 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01696 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01696 Gene

Drugs & Compounds for LINC01696 Gene

No Compound Related Data Available

Transcripts for LINC01696 Gene

mRNA/cDNA for LINC01696 Gene

8 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
4 LncBook transcripts :
3 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01696 Gene

No ASD Table

Relevant External Links for LINC01696 Gene

GeneLoc Exon Structure for
LINC01696

Expression for LINC01696 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01696 Gene

Orthologs for LINC01696 Gene

Evolution for LINC01696 Gene

ENSEMBL:
Gene Tree for LINC01696 (if available)
TreeFam:
Gene Tree for LINC01696 (if available)

No data available for Orthologs for LINC01696 Gene

Paralogs for LINC01696 Gene

No data available for Paralogs for LINC01696 Gene

Variants for LINC01696 Gene

Additional dbSNP identifiers (rs#s) for LINC01696 Gene

Additional Variant Information for LINC01696 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01696

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01696 Gene

Disorders for LINC01696 Gene

Additional Disease Information for LINC01696

No disorders were found for LINC01696 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01696 Gene

Publications for LINC01696 Gene

No publications were found for LINC01696 Gene.

No data available for Mastermind for LINC01696 Gene

Products for LINC01696 Gene

Sources for LINC01696 Gene