Aliases for LINC01673 Gene

Subcategory (RNA class) for LINC01673 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01673 Gene

  • Long Intergenic Non-Protein Coding RNA 1673 2 3 5
  • LINC01673 2 168
  • NONHSAG032597 92
  • HSALNG0132459 167

External Ids for LINC01673 Gene

Summaries for LINC01673 Gene

GeneCards Summary for LINC01673 Gene

LINC01673 (Long Intergenic Non-Protein Coding RNA 1673) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01673 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01673 Gene

Genomics for LINC01673 Gene

GeneHancer (GH) Regulatory Elements for LINC01673 Gene

Promoters and enhancers for LINC01673 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J027644 Enhancer 0.7 Ensembl ENCODE 0.4 +9.0 9012 5.4 FOS EZH2 MAFK JUND GATA2 ATF2 JUN BHLHE40 POLR2A STAT3 ENSG00000223563 LINC01673 piR-47211-429
GH21J027627 Enhancer 0.4 Ensembl 0.4 -11.4 -11380 0.4 ZNF639 NCOA2 HDAC2 LINC01673 piR-31534-448
GH21J027673 Enhancer 0.5 Ensembl ENCODE 0.3 +35.8 35758 1.5 CEBPB EZH2 piR-40110-436 LINC01673 LINC00113
GH21J027622 Enhancer 0.3 ENCODE 0.4 -15.7 -15701 1.7 POLR2A LINC01673 piR-31534-448
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01673 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01673 Gene

Genomic Locations for LINC01673 Gene
chr21:27,638,581-27,675,024
(GRCh38/hg38)
Size:
36,444 bases
Orientation:
Plus strand
chr21:29,011,012-29,025,810
(GRCh37/hg19)
Size:
14,799 bases
Orientation:
Plus strand

Genomic View for LINC01673 Gene

Genes around LINC01673 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01673 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01673 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01673 Gene

Proteins for LINC01673 Gene

Post-translational modifications for LINC01673 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01673 Gene

Domains & Families for LINC01673 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01673 Gene

Function for LINC01673 Gene

Phenotypes From GWAS Catalog for LINC01673 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01673 Gene

Localization for LINC01673 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01673 Gene

Pathways & Interactions for LINC01673 Gene

PathCards logo

SuperPathways for LINC01673 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01673 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01673 Gene

Drugs & Compounds for LINC01673 Gene

No Compound Related Data Available

Transcripts for LINC01673 Gene

mRNA/cDNA for LINC01673 Gene

11 RNACentral transcripts :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
6 NONCODE transcripts :
5 LncBook transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01673 Gene

No ASD Table

Relevant External Links for LINC01673 Gene

GeneLoc Exon Structure for
LINC01673

Expression for LINC01673 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01673 Gene

Orthologs for LINC01673 Gene

Evolution for LINC01673 Gene

ENSEMBL:
Gene Tree for LINC01673 (if available)
TreeFam:
Gene Tree for LINC01673 (if available)

No data available for Orthologs for LINC01673 Gene

Paralogs for LINC01673 Gene

No data available for Paralogs for LINC01673 Gene

Variants for LINC01673 Gene

Additional dbSNP identifiers (rs#s) for LINC01673 Gene

Additional Variant Information for LINC01673 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01673

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01673 Gene

Disorders for LINC01673 Gene

No disorders were found for LINC01673 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01673 Gene

Publications for LINC01673 Gene

No publications were found for LINC01673 Gene.

No data available for Mastermind for LINC01673 Gene

Products for LINC01673 Gene

Sources for LINC01673 Gene