Aliases for LINC01659 Gene

Subcategory (RNA class) for LINC01659 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01659 Gene

  • Long Intergenic Non-Protein Coding RNA 1659 2 3 5
  • LINC01659 2 5 165
  • NONHSAG033471.2 91
  • HSALNG0134397 164

External Ids for LINC01659 Gene

Additional External Ids for LINC01659 Gene

Previous GeneCards Identifiers for LINC01659 Gene

  • GC22P023530
  • GC22P023577
  • GC22P023643
  • GC22P023845
  • GC22P023434
  • GC22P023436
  • GC22P023483

Summaries for LINC01659 Gene

GeneCards Summary for LINC01659 Gene

LINC01659 (Long Intergenic Non-Protein Coding RNA 1659) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01659 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01659 Gene

Genomics for LINC01659 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01659 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01659 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01659 Gene

Genomic Locations for LINC01659 Gene
chr22:23,433,528-23,435,072
(GRCh38/hg38)
Size:
1,545 bases
Orientation:
Plus strand
chr22:23,775,751-23,777,258
(GRCh37/hg19)
Size:
1,508 bases
Orientation:
Plus strand

Genomic View for LINC01659 Gene

Genes around LINC01659 on UCSC Golden Path with GeneCards custom track
LINC01659 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01659 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01659 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01659 Gene

Proteins for LINC01659 Gene

Post-translational modifications for LINC01659 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01659 Gene

Domains & Families for LINC01659 Gene

Gene Families for LINC01659 Gene

genes like me logo Genes that share domains with LINC01659: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01659 Gene

Function for LINC01659 Gene

Phenotypes From GWAS Catalog for LINC01659 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01659 Gene

Localization for LINC01659 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01659 Gene

Pathways & Interactions for LINC01659 Gene

PathCards logo

SuperPathways for LINC01659 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01659 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01659 Gene

Drugs & Compounds for LINC01659 Gene

No Compound Related Data Available

Transcripts for LINC01659 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01659 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005847BA_9606 lncRNA 917 6

HGNC: 52447,

RefSeq: NR_110538,

Ensembl: ENST00000449711 (view in UCSC) , ENST00000629950 (view in UCSC) ,

LncBook: HSALNT0275858,

LNCipedia: LINC01659:8,

NONCODE: NONHSAT083884.2,

URS00003CFB4E_9606 lncRNA 337 3

Ensembl: ENST00000428415 (view in UCSC) , ENST00000626293 (view in UCSC) ,

LNCipedia: LINC01659:9,

NONCODE: NONHSAT083885.2,

URS00009C5793_9606 lncRNA 1083 2

LncBook: HSALNT0275859,

NONCODE: NONHSAT192127.1,

URS0000D57EDE_9606 lncRNA 980 2

LncBook: HSALNT0275857,

LNCipedia: LINC01659:6,

URS0000D5DC7D_9606 lncRNA 953 2

LncBook: HSALNT0275856,

LNCipedia: LINC01659:7,

LINC01659 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01659 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01659 Gene

No ASD Table

Relevant External Links for LINC01659 Gene

GeneLoc Exon Structure for
LINC01659

Expression for LINC01659 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01659

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01659 Gene

Orthologs for LINC01659 Gene

Evolution for LINC01659 Gene

ENSEMBL:
Gene Tree for LINC01659 (if available)
TreeFam:
Gene Tree for LINC01659 (if available)

No data available for Orthologs for LINC01659 Gene

Paralogs for LINC01659 Gene

No data available for Paralogs for LINC01659 Gene

Variants for LINC01659 Gene

Additional dbSNP identifiers (rs#s) for LINC01659 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01659 Gene

Variant ID Type Subtype PubMed ID
dgv4528n100 CNV gain 25217958
dgv8039n54 CNV gain 21841781
esv2724041 CNV deletion 23290073
esv2762117 CNV gain 21179565
esv3575443 CNV gain 25503493
esv3893457 CNV gain 25118596
nsv1059951 CNV gain 25217958
nsv1062411 CNV gain 25217958
nsv1066891 CNV gain 25217958
nsv469702 CNV gain 16826518
nsv526567 CNV gain 19592680
nsv588601 CNV gain 21841781
nsv7350 OTHER inversion 18451855
nsv834154 CNV gain 17160897
nsv9876 CNV gain+loss 18304495

Additional Variant Information for LINC01659 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01659

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01659 Gene

Disorders for LINC01659 Gene

No disorders were found for LINC01659 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01659 Gene

Publications for LINC01659 Gene

No publications were found for LINC01659 Gene.

Products for LINC01659 Gene

Sources for LINC01659 Gene