Aliases for LINC01634 Gene

Subcategory (RNA class) for LINC01634 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01634 Gene

  • Long Intergenic Non-Protein Coding RNA 1634 2 3 5
  • LINC01634 2 5 165
  • XXbac-B476C20.17 3
  • NONHSAG033224.2 91
  • HSALNG0133942 164

External Ids for LINC01634 Gene

Summaries for LINC01634 Gene

GeneCards Summary for LINC01634 Gene

LINC01634 (Long Intergenic Non-Protein Coding RNA 1634) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01634 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01634 Gene

Genomics for LINC01634 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01634 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J018028 Promoter/Enhancer 0.8 EPDnew Ensembl 619 -0.2 -184 0.8 RUNX3 CEBPG ATF4 CEBPB ATF3 LINC01634 MICAL3 PEX26
GH22J018031 Enhancer 0.3 Ensembl 613 +0.6 616 0.4 ZNF512 ZNF366 LINC01634 MICAL3 piR-56759-365 PEX26
GH22J018022 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 19.4 -5.4 -5384 2.4 HNRNPL PRDM10 CTCF ZNF692 BACH1 LARP7 PRDM1 MTA2 ZNF143 ZIC2 MICAL3 HSALNG0133941 LINC01634 BID
GH22J018030 Enhancer 1.1 Ensembl ENCODE dbSUPER 15.6 +4.4 4394 6.4 CEBPG GATAD2A ZNF629 PKNOX1 PBX2 CEBPA CEBPB SP1 JUND NR3C1 LINC01634 PEX26 ENSG00000225335 ENSG00000236890 MICAL3 piR-56759-365
GH22J018012 Enhancer 0.9 Ensembl ENCODE dbSUPER 11.5 -16.7 -16684 2.6 DPF2 ZNF316 MAFF MAFK NBN HDGF IKZF1 GLIS1 MTA2 EMSY LINC01634 PEX26 ENSG00000225335 ENSG00000236890 ENSG00000234913 ENSG00000237446 MICAL3 BID
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01634 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01634 Gene

Genomic Locations for LINC01634 Gene
chr22:18,029,385-18,043,077
(GRCh38/hg38)
Size:
13,693 bases
Orientation:
Plus strand
chr22:18,512,151-18,520,734
(GRCh37/hg19)
Size:
8,584 bases
Orientation:
Plus strand

Genomic View for LINC01634 Gene

Genes around LINC01634 on UCSC Golden Path with GeneCards custom track
LINC01634 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01634 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01634 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01634 Gene

Proteins for LINC01634 Gene

Post-translational modifications for LINC01634 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01634 Gene

Domains & Families for LINC01634 Gene

Gene Families for LINC01634 Gene

genes like me logo Genes that share domains with LINC01634: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01634 Gene

Function for LINC01634 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01634 Gene

Localization for LINC01634 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01634 Gene

Pathways & Interactions for LINC01634 Gene

PathCards logo

SuperPathways for LINC01634 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01634 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01634 Gene

Drugs & Compounds for LINC01634 Gene

No Compound Related Data Available

Transcripts for LINC01634 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01634 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003870FB_9606 lncRNA 2379 5

HGNC: 52421,

RefSeq: NR_024417,

Ensembl: ENST00000443243 (view in UCSC) ,

LNCipedia: LINC01634:4,

NONCODE: NONHSAT083250.2,

URS00008C04A5_9606 lncRNA 445 3

LncBook: HSALNT0275124,

LNCipedia: LINC01634:5,

NONCODE: NONHSAT083251.2,

LINC01634 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01634 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01634 Gene

No ASD Table

Relevant External Links for LINC01634 Gene

GeneLoc Exon Structure for
LINC01634

Expression for LINC01634 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01634

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01634 Gene

Orthologs for LINC01634 Gene

Evolution for LINC01634 Gene

ENSEMBL:
Gene Tree for LINC01634 (if available)
TreeFam:
Gene Tree for LINC01634 (if available)

No data available for Orthologs for LINC01634 Gene

Paralogs for LINC01634 Gene

No data available for Paralogs for LINC01634 Gene

Variants for LINC01634 Gene

Additional dbSNP identifiers (rs#s) for LINC01634 Gene

Additional Variant Information for LINC01634 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01634

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01634 Gene

Disorders for LINC01634 Gene

No disorders were found for LINC01634 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01634 Gene

Publications for LINC01634 Gene

No publications were found for LINC01634 Gene.

No data available for Mastermind for LINC01634 Gene

Products for LINC01634 Gene

Sources for LINC01634 Gene