Aliases for LINC01633 Gene

Subcategory (RNA class) for LINC01633 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01633 Gene

  • Long Intergenic Non-Protein Coding RNA 1633 2 3 5
  • LINC01633 2 168
  • NONHSAG003722 92
  • HSALNG0009031 167
  • GS1-120K12.4 3

External Ids for LINC01633 Gene

Summaries for LINC01633 Gene

GeneCards Summary for LINC01633 Gene

LINC01633 (Long Intergenic Non-Protein Coding RNA 1633) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01633 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01633 Gene

Genomics for LINC01633 Gene

GeneHancer (GH) Regulatory Elements for LINC01633 Gene

Promoters and enhancers for LINC01633 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J184982 Enhancer 1 Ensembl ENCODE 0.4 -17.5 -17509 0.8 CTCF ZIC2 REST NR3C1 MYC RAD21 CTBP1 TRIM22 SMC3 OSR2 SWT1 TRMT1L NIBAN1 ENSG00000233583 LINC01633
GH01J184989 Enhancer 0.5 Ensembl 0.4 -9.0 -9009 2.2 ZNF316 MAFF MAFK CEBPB EP300 STAT3 ATF4 ZNF398 FOS RNF2 SWT1 TRMT1L NIBAN1 LINC01633
GH01J184987 Enhancer 0.4 Ensembl 0.4 -11.6 -11609 1.4 ZNF316 MCM5 CEBPB EMSY RNF2 SWT1 TRMT1L NIBAN1 LINC01633
GH01J184995 Enhancer 0.2 Ensembl 0.7 -4.4 -4409 0.2 NIBAN1 LINC01633
GH01J184980 Enhancer 0.2 Ensembl 0.4 -18.6 -18609 0.6 NIBAN1 LINC01633
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01633 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01633 Gene

Genomic Locations for LINC01633 Gene
chr1:184,999,710-185,008,789
(GRCh38/hg38)
Size:
9,080 bases
Orientation:
Plus strand
chr1:184,970,659-184,977,815
(GRCh37/hg19)
Size:
7,157 bases
Orientation:
Plus strand

Genomic View for LINC01633 Gene

Genes around LINC01633 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01633 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01633 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01633 Gene

Proteins for LINC01633 Gene

Post-translational modifications for LINC01633 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01633 Gene

Domains & Families for LINC01633 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01633 Gene

Function for LINC01633 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01633 Gene

Localization for LINC01633 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01633 Gene

Pathways & Interactions for LINC01633 Gene

PathCards logo

SuperPathways for LINC01633 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01633 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01633 Gene

Drugs & Compounds for LINC01633 Gene

No Compound Related Data Available

Transcripts for LINC01633 Gene

mRNA/cDNA for LINC01633 Gene

4 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01633 Gene

No ASD Table

Relevant External Links for LINC01633 Gene

GeneLoc Exon Structure for
LINC01633

Expression for LINC01633 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01633 Gene

Orthologs for LINC01633 Gene

Evolution for LINC01633 Gene

ENSEMBL:
Gene Tree for LINC01633 (if available)
TreeFam:
Gene Tree for LINC01633 (if available)

No data available for Orthologs for LINC01633 Gene

Paralogs for LINC01633 Gene

No data available for Paralogs for LINC01633 Gene

Variants for LINC01633 Gene

Additional dbSNP identifiers (rs#s) for LINC01633 Gene

Additional Variant Information for LINC01633 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01633

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01633 Gene

Disorders for LINC01633 Gene

Additional Disease Information for LINC01633

No disorders were found for LINC01633 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01633 Gene

Publications for LINC01633 Gene

  1. Identification of 9 novel transcripts and two RGSL genes within the hereditary prostate cancer region (HPC1) at 1q25. (PMID: 12801632) Silva AP … Camargo AA (Gene 2003) 3 54

Products for LINC01633 Gene

Sources for LINC01633 Gene