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Aliases for LINC01614 Gene

Subcategory (RNA class) for LINC01614 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01614 Gene

  • Long Intergenic Non-Protein Coding RNA 1614 2 3 5
  • Lung Cancer Associated LncRNA 4 2 3
  • TCONS_00003105 3
  • LCAL4 3

External Ids for LINC01614 Gene

Summaries for LINC01614 Gene

GeneCards Summary for LINC01614 Gene

LINC01614 (Long Intergenic Non-Protein Coding RNA 1614) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01614 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01614 Gene

Genomics for LINC01614 Gene

GeneHancer (GH) Regulatory Elements for LINC01614 Gene

Promoters and enhancers for LINC01614 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I215716 Enhancer 0.6 Ensembl ENCODE dbSUPER 550.8 +0.0 46 2.2 LINC01614 ENSG00000216721 LINC00607
GH02I215698 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -17.7 -17666 4.8 ELF3 FOXA2 RARA FOS KAT8 TGIF2 NFIL3 RFX3 KLF16 RCOR2 ATIC LINC01614 GC02M215662 LINC00607 LOC102724861
GH02I215710 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.6 -5577 4.3 ELF3 PKNOX1 FOXA2 DMAP1 RAD21 RARA YY1 CREM CEBPB NFIL3 LINC01614 GC02M215662 LINC00607 LOC102724861
GH02I215747 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +32.1 32097 4.6 FOXA2 MLX ZFP64 ARID4B DMAP1 ZNF48 ETS1 YY1 SLC30A9 ATF7 ATIC FN1 LINC01614 ENSG00000216721 LINC00607
GH02I215727 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +10.9 10881 3.5 ELF3 FOXA2 DMAP1 RAD21 RARA YY1 CREM JUNB ZNF217 CEBPA LINC01614 ENSG00000216721 LINC00607
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01614 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01614 Gene

Genomic Locations for LINC01614 Gene
chr2:215,717,969-215,720,946
(GRCh38/hg38)
Size:
2,978 bases
Orientation:
Plus strand
chr2:216,582,766-216,584,147
(GRCh37/hg19)

Genomic View for LINC01614 Gene

Genes around LINC01614 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01614 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01614 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01614 Gene

Proteins for LINC01614 Gene

Post-translational modifications for LINC01614 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01614 Gene

Domains & Families for LINC01614 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01614 Gene

Function for LINC01614 Gene

Phenotypes From GWAS Catalog for LINC01614 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01614 Gene

Localization for LINC01614 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01614 Gene

Pathways & Interactions for LINC01614 Gene

SuperPathways for LINC01614 Gene

No Data Available

Interacting Proteins for LINC01614 Gene

Gene Ontology (GO) - Biological Process for LINC01614 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01614 Gene

Drugs & Compounds for LINC01614 Gene

No Compound Related Data Available

Transcripts for LINC01614 Gene

mRNA/cDNA for LINC01614 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01614 Gene

No ASD Table

Relevant External Links for LINC01614 Gene

GeneLoc Exon Structure for
LINC01614
ECgene alternative splicing isoforms for
LINC01614

Expression for LINC01614 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01614 Gene:

LINC01614
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01614 Gene

Orthologs for LINC01614 Gene

Evolution for LINC01614 Gene

ENSEMBL:
Gene Tree for LINC01614 (if available)
TreeFam:
Gene Tree for LINC01614 (if available)

No data available for Orthologs for LINC01614 Gene

Paralogs for LINC01614 Gene

No data available for Paralogs for LINC01614 Gene

Variants for LINC01614 Gene

Sequence variations from dbSNP and Humsavar for LINC01614 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000185882 -- 215,718,077(+) C/T non_coding_transcript_variant
rs1000456541 -- 215,717,825(+) C/T upstream_transcript_variant
rs1000488278 -- 215,717,850(+) T/C upstream_transcript_variant
rs1000752165 -- 215,716,427(+) G/T upstream_transcript_variant
rs1001680779 -- 215,716,699(+) C/G upstream_transcript_variant

Additional Variant Information for LINC01614 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01614

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01614 Gene

Disorders for LINC01614 Gene

No disorders were found for LINC01614 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01614 Gene

Publications for LINC01614 Gene

  1. Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer. (PMID: 25116943) White NM … Maher CA (Genome biology 2014) 2 3 58
  2. A novel lncRNA, LUADT1, promotes lung adenocarcinoma proliferation via the epigenetic suppression of p27. (PMID: 26291312) Qiu M … Xu L (Cell death & disease 2015) 3 58

Products for LINC01614 Gene

Sources for LINC01614 Gene

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