Aliases for LINC01591 Gene

Subcategory (RNA class) for LINC01591 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01591 Gene

  • Long Intergenic Non-Protein Coding RNA 1591 2 3 5
  • LINC01591 2 168
  • NONHSAG051362 92
  • HSALNG0068847 167

External Ids for LINC01591 Gene

Summaries for LINC01591 Gene

GeneCards Summary for LINC01591 Gene

LINC01591 (Long Intergenic Non-Protein Coding RNA 1591) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01591 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01591 Gene

Genomics for LINC01591 Gene

GeneHancer (GH) Regulatory Elements for LINC01591 Gene

Promoters and enhancers for LINC01591 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J135236 Enhancer 0.6 Ensembl ENCODE dbSUPER 500.7 +2.0 1984 0.6 REST LINC01591 piR-56341-235
GH08J135234 Enhancer 0.4 FANTOM5 dbSUPER 500.7 +0.8 784 0.2 LINC01591 piR-56341-235
GH08J135235 Enhancer 0.3 ENCODE dbSUPER 500.7 +1.6 1583 0.2 LINC01591 piR-56341-235
GH08J135228 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -5.0 -5029 1.4 FOS FOSL1 STAT3 JUN JUND FOSL2 MYC LINC01591 HSALNG0068843
GH08J135221 Enhancer 0.3 dbSUPER 0.4 -11.8 -11774 2.3 FOS MYC LINC01591 HSALNG0068843
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01591 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01591 Gene

Genomic Locations for LINC01591 Gene
chr8:135,234,130-135,299,720
(GRCh38/hg38)
Size:
65,591 bases
Orientation:
Plus strand
chr8:136,246,374-136,311,962
(GRCh37/hg19)
Size:
65,589 bases
Orientation:
Plus strand

Genomic View for LINC01591 Gene

Genes around LINC01591 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01591 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01591 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01591 Gene

Proteins for LINC01591 Gene

Post-translational modifications for LINC01591 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01591 Gene

Domains & Families for LINC01591 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01591 Gene

Function for LINC01591 Gene

Phenotypes From GWAS Catalog for LINC01591 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01591 Gene

Localization for LINC01591 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01591 Gene

Pathways & Interactions for LINC01591 Gene

PathCards logo

SuperPathways for LINC01591 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01591 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01591 Gene

Drugs & Compounds for LINC01591 Gene

No Compound Related Data Available

Transcripts for LINC01591 Gene

mRNA/cDNA for LINC01591 Gene

14 RNACentral transcripts :
3 REFSEQ mRNAs :
5 NCBI additional mRNA sequence :
5 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 NONCODE transcripts :
1 LncBook transcripts :
8 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01591 Gene

No ASD Table

Relevant External Links for LINC01591 Gene

GeneLoc Exon Structure for
LINC01591

Expression for LINC01591 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01591 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01591

genes like me logo Genes that share expression patterns with LINC01591: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01591 Gene

Orthologs for LINC01591 Gene

Evolution for LINC01591 Gene

ENSEMBL:
Gene Tree for LINC01591 (if available)
TreeFam:
Gene Tree for LINC01591 (if available)

No data available for Orthologs for LINC01591 Gene

Paralogs for LINC01591 Gene

No data available for Paralogs for LINC01591 Gene

Variants for LINC01591 Gene

Additional dbSNP identifiers (rs#s) for LINC01591 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01591 Gene

Variant ID Type Subtype PubMed ID
esv3618920 CNV loss 21293372
nsv6411 CNV deletion 18451855
nsv831468 CNV gain 17160897

Additional Variant Information for LINC01591 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01591

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01591 Gene

Disorders for LINC01591 Gene

Additional Disease Information for LINC01591

No disorders were found for LINC01591 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01591 Gene

Publications for LINC01591 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 54

No data available for Mastermind for LINC01591 Gene

Products for LINC01591 Gene

Sources for LINC01591 Gene