Aliases for LINC01572 Gene

Subcategory (RNA class) for LINC01572 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01572 Gene

  • Long Intergenic Non-Protein Coding RNA 1572 2 3 5
  • LINC01572 2 5 165
  • NONHSAG019920.2 91
  • NONHSAG019917.2 91
  • HSALNG0112544 164

External Ids for LINC01572 Gene

Previous GeneCards Identifiers for LINC01572 Gene

  • GC16M072269
  • GC16M072283

Summaries for LINC01572 Gene

GeneCards Summary for LINC01572 Gene

LINC01572 (Long Intergenic Non-Protein Coding RNA 1572) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01572 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01572 Gene

Genomics for LINC01572 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01572 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01572 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01572 Gene

Genomic Locations for LINC01572 Gene
chr16:72,236,281-72,665,014
(GRCh38/hg38)
Size:
428,734 bases
Orientation:
Minus strand

Genomic View for LINC01572 Gene

Genes around LINC01572 on UCSC Golden Path with GeneCards custom track
LINC01572 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01572 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01572 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01572 Gene

Proteins for LINC01572 Gene

Post-translational modifications for LINC01572 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01572 Gene

Domains & Families for LINC01572 Gene

Gene Families for LINC01572 Gene

genes like me logo Genes that share domains with LINC01572: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01572 Gene

Function for LINC01572 Gene

Phenotypes From GWAS Catalog for LINC01572 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01572 Gene

Localization for LINC01572 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01572 Gene

Pathways & Interactions for LINC01572 Gene

PathCards logo

SuperPathways for LINC01572 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01572 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01572 Gene

Drugs & Compounds for LINC01572 Gene

No Compound Related Data Available

Transcripts for LINC01572 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01572 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000032F374_9606 lncRNA 568 4

Ensembl: ENST00000563770 (view in UCSC) ,

LncBook: HSALNT0233268,

LNCipedia: LINC01572:7,

NONCODE: NONHSAT143577.2,

URS00005FA47E_9606 lncRNA 563 4

Ensembl: ENST00000563823 (view in UCSC) ,

LncBook: HSALNT0233285,

LNCipedia: LINC01572:8,

NONCODE: NONHSAT143583.2,

URS0000487740_9606 lncRNA 2194 3

Ensembl: ENST00000561611 (view in UCSC) ,

LNCipedia: LINC01572:4,

NONCODE: NONHSAT143565.2,

URS00002C2C74_9606 lncRNA 831 3

Ensembl: ENST00000570035 (view in UCSC) ,

LNCipedia: LINC01572:1,

NONCODE: NONHSAT143582.2,

URS0000D77FFD_9606 lncRNA 4088 2

HGNC: 51385,

RefSeq: NR_126330,

LINC01572 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01572 Gene

6 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01572 Gene

No ASD Table

Relevant External Links for LINC01572 Gene

GeneLoc Exon Structure for
LINC01572

Expression for LINC01572 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01572 Gene

genes like me logo Genes that share expression patterns with LINC01572: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01572 Gene

Orthologs for LINC01572 Gene

Evolution for LINC01572 Gene

ENSEMBL:
Gene Tree for LINC01572 (if available)
TreeFam:
Gene Tree for LINC01572 (if available)

No data available for Orthologs for LINC01572 Gene

Paralogs for LINC01572 Gene

No data available for Paralogs for LINC01572 Gene

Variants for LINC01572 Gene

Additional dbSNP identifiers (rs#s) for LINC01572 Gene

Additional Variant Information for LINC01572 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01572

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01572 Gene

Disorders for LINC01572 Gene

Additional Disease Information for LINC01572

No disorders were found for LINC01572 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01572 Gene

Publications for LINC01572 Gene

  1. VIRMA mediates preferential m6A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. (PMID: 29507755) Yue Y … Liu J (Cell discovery 2018) 3
  2. Long non-coding RNA LINC-01572:28 inhibits granulosa cell growth via a decrease in p27 (Kip1) degradation in patients with polycystic ovary syndrome. (PMID: 30293818) Zhao J … Chen ZJ (EBioMedicine 2018) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

Products for LINC01572 Gene

Sources for LINC01572 Gene