Aliases for LINC01569 Gene

Subcategory (RNA class) for LINC01569 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01569 Gene

  • Long Intergenic Non-Protein Coding RNA 1569 2 3 5
  • LINC01569 2 5 165
  • TCONS_00024567 2 3
  • NONHSAG018432.2 91
  • HSALNG0109218 164

External Ids for LINC01569 Gene

Summaries for LINC01569 Gene

GeneCards Summary for LINC01569 Gene

LINC01569 (Long Intergenic Non-Protein Coding RNA 1569) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01569 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01569 Gene

Genomics for LINC01569 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01569 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01569 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01569 Gene

Genomic Locations for LINC01569 Gene
chr16:4,243,571-4,253,817
(GRCh38/hg38)
Size:
10,247 bases
Orientation:
Minus strand
chr16:4,295,826-4,303,790
(GRCh37/hg19)
Size:
7,965 bases
Orientation:
Minus strand

Genomic View for LINC01569 Gene

Genes around LINC01569 on UCSC Golden Path with GeneCards custom track
LINC01569 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01569 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01569 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01569 Gene

Proteins for LINC01569 Gene

Post-translational modifications for LINC01569 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01569 Gene

Domains & Families for LINC01569 Gene

Gene Families for LINC01569 Gene

genes like me logo Genes that share domains with LINC01569: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01569 Gene

Function for LINC01569 Gene

Phenotypes From GWAS Catalog for LINC01569 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01569 Gene

Localization for LINC01569 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01569 Gene

Pathways & Interactions for LINC01569 Gene

PathCards logo

SuperPathways for LINC01569 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01569 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01569 Gene

Drugs & Compounds for LINC01569 Gene

No Compound Related Data Available

Transcripts for LINC01569 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01569 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000000B904_9606 lncRNA 2093 5

HGNC: 51380,

RefSeq: NR_039999,

LncBook: HSALNT0227045,

LNCipedia: LINC01569:3,

NONCODE: NONHSAT148102.2,

URS000029B7BC_9606 lncRNA 694 4

Ensembl: ENST00000573268 (view in UCSC) ,

LncBook: HSALNT0227073,

LNCipedia: LINC01569:5,

NONCODE: NONHSAT148113.2,

URS0000DB76CB_9606 lncRNA 3975 1

Ensembl: ENST00000649264 (view in UCSC) ,

URS0000DBA8EF_9606 lncRNA 1903 1

Ensembl: ENST00000573042 (view in UCSC) ,

URS0000DBAFEF_9606 lncRNA 1903 1

Ensembl: ENST00000648108 (view in UCSC) ,

LINC01569 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01569 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01569 Gene

No ASD Table

Relevant External Links for LINC01569 Gene

GeneLoc Exon Structure for
LINC01569

Expression for LINC01569 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01569 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01569

genes like me logo Genes that share expression patterns with LINC01569: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01569 Gene

Orthologs for LINC01569 Gene

Evolution for LINC01569 Gene

ENSEMBL:
Gene Tree for LINC01569 (if available)
TreeFam:
Gene Tree for LINC01569 (if available)

No data available for Orthologs for LINC01569 Gene

Paralogs for LINC01569 Gene

No data available for Paralogs for LINC01569 Gene

Variants for LINC01569 Gene

Additional dbSNP identifiers (rs#s) for LINC01569 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01569 Gene

Variant ID Type Subtype PubMed ID
esv21490 CNV gain+loss 19812545
esv2665246 CNV deletion 23128226
esv3637694 CNV loss 21293372
nsv1046986 CNV gain 25217958
nsv527866 CNV loss 19592680

Additional Variant Information for LINC01569 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01569

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01569 Gene

Disorders for LINC01569 Gene

Additional Disease Information for LINC01569

No disorders were found for LINC01569 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01569 Gene

Publications for LINC01569 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

Products for LINC01569 Gene

Sources for LINC01569 Gene