Aliases for LINC01569 Gene

Subcategory (RNA class) for LINC01569 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for LINC01569 Gene

  • Long Intergenic Non-Protein Coding RNA 1569 2 3 5
  • LINC01569 2 170
  • TCONS_00024567 3
  • HSALNG0109218 169
  • NONHSAG018432 94

External Ids for LINC01569 Gene

Summaries for LINC01569 Gene

GeneCards Summary for LINC01569 Gene

LINC01569 (Long Intergenic Non-Protein Coding RNA 1569) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01569 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01569 Gene

Genomics for LINC01569 Gene

GeneHancer (GH) Regulatory Elements for LINC01569 Gene

Promoters and enhancers for LINC01569 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01569 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01569 Gene

Genomic Locations for LINC01569 Gene
chr16:4,243,571-4,253,817
(GRCh38/hg38)
Size:
10,247 bases
Orientation:
Minus strand
chr16:4,295,826-4,303,790
(GRCh37/hg19)
Size:
7,965 bases
Orientation:
Minus strand

Genomic View for LINC01569 Gene

Genes around LINC01569 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01569 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01569 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01569 Gene

Proteins for LINC01569 Gene

Post-translational modifications for LINC01569 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01569 Gene

Domains & Families for LINC01569 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01569 Gene

Function for LINC01569 Gene

Phenotypes From GWAS Catalog for LINC01569 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01569 Gene

Localization for LINC01569 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01569 Gene

Pathways & Interactions for LINC01569 Gene

PathCards logo

SuperPathways for LINC01569 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01569 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01569 Gene

Drugs & Compounds for LINC01569 Gene

No Compound Related Data Available

Transcripts for LINC01569 Gene

mRNA/cDNA for LINC01569 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(8) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(33) RNACentral transcripts :
(18) LncBook transcripts :
(26) LNCipedia transcripts :
(14) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01569 Gene

No ASD Table

Relevant External Links for LINC01569 Gene

GeneLoc Exon Structure for
LINC01569
ECgene alternative splicing isoforms for
LINC01569

Expression for LINC01569 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01569 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01569 Gene:

LINC01569
genes like me logo Genes that share expression patterns with LINC01569: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01569 Gene

Orthologs for LINC01569 Gene

Evolution for LINC01569 Gene

ENSEMBL:
Gene Tree for LINC01569 (if available)
TreeFam:
Gene Tree for LINC01569 (if available)

No data available for Orthologs for LINC01569 Gene

Paralogs for LINC01569 Gene

No data available for Paralogs for LINC01569 Gene

Variants for LINC01569 Gene

Sequence variations from dbSNP and Humsavar for LINC01569 Gene

SNP ID Clin Chr 16 pos Variation AA Info Type
rs1000061731 -- 4,253,041(-) G/C intron_variant
rs1000119364 -- 4,250,666(-) G/A intron_variant
rs1000326682 -- 4,246,463(-) A/G non_coding_transcript_variant
rs1000488899 -- 4,249,735(-) T/A intron_variant
rs1000498959 -- 4,250,920(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01569 Gene

Variant ID Type Subtype PubMed ID
esv21490 CNV gain+loss 19812545
esv2665246 CNV deletion 23128226
esv3637694 CNV loss 21293372
nsv1046986 CNV gain 25217958
nsv527866 CNV loss 19592680

Additional Variant Information for LINC01569 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01569

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01569 Gene

Disorders for LINC01569 Gene

Additional Disease Information for LINC01569

No disorders were found for LINC01569 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01569 Gene

Publications for LINC01569 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56

Products for LINC01569 Gene

Sources for LINC01569 Gene