Aliases for LINC01524 Gene

Data sources for LINC01524 Gene:

RNA type for LINC01524 Gene


Aliases for LINC01524 Gene

External Ids for LINC01524 Gene

Previous GeneCards Identifiers for LINC01524 Gene

  • GC20P052210

Summaries for LINC01524 Gene

GeneCards Summary for LINC01524 Gene

LINC01524 (Long Intergenic Non-Protein Coding RNA 1524) is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for LINC01524 Gene

  • Metazoan signal recognition particle RNA

Additional gene information for LINC01524 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for LINC01524 Gene

Genomics for LINC01524 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01524 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J052190 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 250.7 -0.6 -554 3.2 BCLAF1 MYC IKZF1 SSRP1 NFIC POLR2A ZIC2 ZBTB10 YY1 MXD4 ZFP64 LINC01524 MK280144-410 SALL4
GH20J052210 Promoter/Enhancer 1.1 EPDnew ENCODE 250.4 +18.4 18409 0.2 MYC SMAD5 TBP HCFC1 NBN ELF1 ATF1 SUPT5H ETV1 NCOA1 HSALNG0130878-001 LOC105372666 LINC01524 ZFP64 TSHZ2
GH20J052971 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.5 +783.7 783732 9 ZNF600 ZNF580 ATF2 ZNF223 ZNF10 ZSCAN16 ZIC2 ZBTB10 YY1 BCL11A TSHZ2 ZFP64 LINC01524 ENSG00000232294 HSALNG0130913-002 ZNF217
GH20J052619 Enhancer 0.4 Ensembl 4.4 +427.4 427441 0.8 BMI1 RFX1 RAD21 POLR2A LOC105372665 LINC01524 piR-35674-312 HSALNG0130878-002 TSHZ2 LOC105372666 ZFP64
GH20J052621 Enhancer 0.3 ENCODE 4.5 +429.9 429920 1.4 PKNOX1 LINC01524 LOC105372665 piR-35674-312 HSALNG0130878-002 TSHZ2 ZFP64 LOC105372666
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01524 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01524 Gene

Latest Assembly
478,420 bases
Plus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
29,589 bases
Plus strand

(GRCh37/hg19 by Ensembl)
439,787 bases
Plus strand

Genomic View for LINC01524 Gene

Genes around LINC01524 on UCSC Golden Path with GeneCards custom track
LINC01524 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01524 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01524 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01524 Gene

Proteins for LINC01524 Gene

Post-translational modifications for LINC01524 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01524 Gene

Domains & Families for LINC01524 Gene

Gene Families for LINC01524 Gene

genes like me logo Genes that share domains with LINC01524: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01524 Gene

Function for LINC01524 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01524 Gene

Localization for LINC01524 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01524 Gene

Pathways & Interactions for LINC01524 Gene

PathCards logo

SuperPathways for LINC01524 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01524 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01524 Gene

Drugs & Compounds for LINC01524 Gene

No Compound Related Data Available

Transcripts for LINC01524 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01524 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00004E78BB_9606 lncRNA 4390 4

Ensembl: ENST00000428009 (view in UCSC) ,

LncBook: HSALNT0268934,

LNCipedia: LINC01524:2,


URS00002E81F5_9606 lncRNA 752 3

Ensembl: ENST00000454600 (view in UCSC) ,

LNCipedia: LINC01524:1,


URS000075D0A5_9606 lncRNA 4385 2

RefSeq: NR_110038,

LNCipedia: LINC01524:3,

URS0000EEF358_9606 lncRNA 1992 1

Ensembl: ENST00000663974 (view in UCSC) ,

URS0000EF65AE_9606 lncRNA 1647 1

Ensembl: ENST00000659137 (view in UCSC) ,

LINC01524 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01524 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01524 Gene

No ASD Table

Relevant External Links for LINC01524 Gene

GeneLoc Exon Structure for

Expression for LINC01524 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01524 Gene

genes like me logo Genes that share expression patterns with LINC01524: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01524 Gene

Orthologs for LINC01524 Gene

Evolution for LINC01524 Gene

Gene Tree for LINC01524 (if available)
Gene Tree for LINC01524 (if available)
Alliance of Genome Resources:
Additional Orthologs for LINC01524

No data available for Orthologs for LINC01524 Gene

Paralogs for LINC01524 Gene

No data available for Paralogs for LINC01524 Gene

Variants for LINC01524 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01524 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for LINC01524 Gene

Variant ID Type Subtype PubMed ID
esv2722526 CNV deletion 23290073
esv3557193 CNV deletion 23714750

Additional Variant Information for LINC01524 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01524 Gene

Disorders for LINC01524 Gene

Additional Disease Information for LINC01524

No disorders were found for LINC01524 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01524 Gene

Publications for LINC01524 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for LINC01524 Gene

Sources for LINC01524 Gene