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LINC01505 (Long Intergenic Non-Protein Coding RNA 1505) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH09J105995 | Enhancer | 0.5 | Ensembl | 600.7 | +1.9 | 1891 | 0.4 | JUND REST USF1 FOSL1 USF2 ATF3 FOS RAD51 FOSL2 | LINC01505 LOC107987109 TMEM38B ZNF462 | |
GH09J105991 | Enhancer | 0.5 | Ensembl ENCODE | 600.7 | -0.5 | -451 | 2.1 | POLR2A SMARCA4 | LINC01505 TMEM38B HSALNG0073463 ZNF462 | |
GH09J106620 | Enhancer | 0.9 | VISTA Ensembl ENCODE CraniofacialAtlas | 4.5 | +628.0 | 628014 | 3 | CEBPB CTCF TBP | ENSG00000237062 LINC01505 RF00100-156 RN7SKP77 lnc-ZNF462-4 ZNF462 TMEM38B | |
GH09J105973 | Enhancer | 0.9 | Ensembl ENCODE CraniofacialAtlas | 0.4 | -17.4 | -17409 | 7 | POLR2A TCF12 RAD21 NFE2 ZNF316 JUNB EBF1 SMARCA4 RFX5 CHD2 | HSALNG0073463 TMEM38B LINC01505 LOC107987108 ZNF462 | |
GH09J106018 | Enhancer | 0.6 | Ensembl ENCODE | 0.3 | +26.2 | 26191 | 3 | SOX13 POLR2A NFIA SMARCA4 NANOG | LOC107987109 piR-46847-285 LINC01505 TMEM38B ZNF462 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS0000A97BE3_9606 | lncRNA | 2298 | 3 |
Ensembl: ENST00000636028 (view in UCSC) , LncBook: HSALNT0153575, LNCipedia: LINC01505:15, |
URS0000541D3F_9606 | lncRNA | 2054 | 3 |
Ensembl: ENST00000444985 (view in UCSC) , LNCipedia: LINC01505:2, NONCODE: NONHSAT133846.2, |
URS0000519364_9606 | lncRNA | 1686 | 3 |
Ensembl: ENST00000435485 (view in UCSC) , LNCipedia: LINC01505:11, NONCODE: NONHSAT133834.2, |
URS0000AA9833_9606 | lncRNA | 4266 | 2 |
Ensembl: ENST00000637046 (view in UCSC) , LNCipedia: LINC01505:14, |
URS000075E3BA_9606 | lncRNA | 2056 | 2 |
HGNC: 51186, RefSeq: NR_104145, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv2116516 | CNV | deletion | 18987734 |
esv3573340 | CNV | loss | 25503493 |
esv3891705 | CNV | loss | 25118596 |
nsv521586 | CNV | loss | 19592680 |
No disorders were found for LINC01505 Gene.