Aliases for LINC01492 Gene

Subcategory (RNA class) for LINC01492 Gene


Number of RNA Genes sources:

3 / 17

Aliases for LINC01492 Gene

  • Long Intergenic Non-Protein Coding RNA 1492 2 3 5
  • LINC01492 2 5 165
  • NONHSAG053081.2 91
  • HSALNG0073362 164

External Ids for LINC01492 Gene

Summaries for LINC01492 Gene

GeneCards Summary for LINC01492 Gene

LINC01492 (Long Intergenic Non-Protein Coding RNA 1492) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01492 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01492 Gene

Genomics for LINC01492 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01492 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J103325 Promoter 0.4 EPDnew 600.7 0.0 -36 0.1 CREB1 LINC01492 ENSG00000226566 CYLC2 SMC2
GH09J103364 Enhancer 0.3 ENCODE 0.3 -39.9 -39940 0.2 ZC3H11A ZFP64 LINC01492 ENSG00000226566 CYLC2 SMC2
GH09J103345 Enhancer 0.2 Ensembl 0.4 -20.8 -20767 0.4 LINC01492 ENSG00000226566 CYLC2 SMC2
GH09J103363 Enhancer 0.2 ENCODE 0.3 -38.1 -38140 0.1 LINC01492 ENSG00000226566 CYLC2 SMC2
GH09J103183 Enhancer 0.5 Ensembl 0.1 +141.3 141333 0.2 NFIC RCOR1 NFIB NFIA CHD2 lnc-CYLC2-4 LOC105376191 LINC01492 CYLC2 SMC2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01492 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01492 Gene

Genomic Locations for LINC01492 Gene
184,512 bases
Minus strand
184,512 bases
Minus strand

Genomic View for LINC01492 Gene

Genes around LINC01492 on UCSC Golden Path with GeneCards custom track
LINC01492 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01492 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01492 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01492 Gene

Proteins for LINC01492 Gene

Post-translational modifications for LINC01492 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01492 Gene

Domains & Families for LINC01492 Gene

Gene Families for LINC01492 Gene

genes like me logo Genes that share domains with LINC01492: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01492 Gene

Function for LINC01492 Gene

Phenotypes From GWAS Catalog for LINC01492 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01492 Gene

Localization for LINC01492 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01492 Gene

Pathways & Interactions for LINC01492 Gene

PathCards logo

SuperPathways for LINC01492 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01492 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01492 Gene

Drugs & Compounds for LINC01492 Gene

No Compound Related Data Available

Transcripts for LINC01492 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01492 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004884CD_9606 lncRNA 659 4

Ensembl: ENST00000425157 (view in UCSC) ,

LncBook: HSALNT0153287,

LNCipedia: LINC01492:5,


URS00004A4672_9606 lncRNA 3738 3

Ensembl: ENST00000411575 (view in UCSC) ,

LNCipedia: LINC01492:1,


URS000075CF6A_9606 lncRNA 3732 3

HGNC: 51149,

RefSeq: NR_121578,

LNCipedia: LINC01492:2,

URS0000137E3B_9606 lncRNA 550 2

Ensembl: ENST00000455051 (view in UCSC) ,

LNCipedia: LINC01492:4,

URS00008B74EA_9606 lncRNA 588 2

LNCipedia: LINC01492:3,


LINC01492 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01492 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01492 Gene

No ASD Table

Relevant External Links for LINC01492 Gene

GeneLoc Exon Structure for

Expression for LINC01492 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01492 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01492

genes like me logo Genes that share expression patterns with LINC01492: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01492 Gene

Orthologs for LINC01492 Gene

Evolution for LINC01492 Gene

Gene Tree for LINC01492 (if available)
Gene Tree for LINC01492 (if available)

No data available for Orthologs for LINC01492 Gene

Paralogs for LINC01492 Gene

No data available for Paralogs for LINC01492 Gene

Variants for LINC01492 Gene

Additional dbSNP identifiers (rs#s) for LINC01492 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01492 Gene

Variant ID Type Subtype PubMed ID
dgv7694n100 CNV gain 25217958
esv2762825 CNV gain 21179565
esv29102 CNV gain 19812545
esv3576687 CNV gain 25503493
esv3621308 CNV gain 21293372
esv3621309 CNV loss 21293372
esv3891700 CNV gain 25118596
esv3891701 CNV loss 25118596
esv3891702 CNV gain 25118596
nsv1117520 CNV tandem duplication 24896259
nsv1126133 CNV deletion 24896259
nsv1137493 CNV deletion 24896259
nsv416783 CNV deletion 16902084
nsv442161 CNV gain 18776908
nsv466455 CNV gain 19166990
nsv466456 CNV loss 19166990
nsv471312 CNV loss 18288195
nsv516844 CNV gain+loss 19592680
nsv615027 CNV gain 21841781
nsv615042 CNV gain 21841781
nsv615043 CNV loss 21841781
nsv615044 CNV loss 21841781
nsv615045 CNV loss 21841781
nsv6648 CNV deletion 18451855
nsv818714 CNV gain 17921354
nsv825022 CNV loss 20364138
nsv972797 CNV duplication 23825009

Additional Variant Information for LINC01492 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01492 Gene

Disorders for LINC01492 Gene

Additional Disease Information for LINC01492

No disorders were found for LINC01492 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01492 Gene

Publications for LINC01492 Gene

  1. Genome-wide association study of Alzheimer's disease with psychotic symptoms. (PMID: 22005930) Hollingworth P … Williams J (Molecular psychiatry 2012) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for LINC01492 Gene

Sources for LINC01492 Gene