Aliases for LINC01467 Gene

Subcategory (RNA class) for LINC01467 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01467 Gene

  • Long Intergenic Non-Protein Coding RNA 1467 2 3 5
  • LINC01467 2 168
  • NONHSAG015604 92
  • HSALNG0102807 167

External Ids for LINC01467 Gene

Summaries for LINC01467 Gene

GeneCards Summary for LINC01467 Gene

LINC01467 (Long Intergenic Non-Protein Coding RNA 1467) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01467 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01467 Gene

Genomics for LINC01467 Gene

GeneHancer (GH) Regulatory Elements for LINC01467 Gene

Promoters and enhancers for LINC01467 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J081655 Enhancer 0.8 Ensembl ENCODE 5 -32.9 -32925 0.8 USF1 FOXA2 JUND HOMEZ RXRA REST HNF4A NFYC CEBPB TAF1 LINC01467 EEF1A1P2 piR-45223
GH14J081656 Enhancer 0.3 Ensembl 5.3 -34.5 -34515 1.6 SMARCA4 LINC01467 EEF1A1P2 piR-45223
GH14J081619 Enhancer 0.4 Ensembl 0.7 +3.2 3185 0.2 ATF2 JUND ATF7 LINC01467 piR-59928-051
GH14J081594 Enhancer 0.6 Ensembl ENCODE 0.3 +28.9 28932 0.3 FOSL2 SMARCA4 JUND RF00017-1637 NONHSAG015604.2 LINC01467
GH14J081586 Enhancer 0.5 Ensembl 0.3 +34.4 34386 3 NR2F2 SMARCA4 ZBTB40 GABPB1 ZBTB11 CEBPA NONHSAG015604.2 RF00017-1637 LINC01467
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01467 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01467 Gene

Genomic Locations for LINC01467 Gene
chr14:81,573,773-81,623,086
(GRCh38/hg38)
Size:
49,314 bases
Orientation:
Minus strand
chr14:82,071,691-82,089,405
(GRCh37/hg19)
Size:
17,715 bases
Orientation:
Minus strand

Genomic View for LINC01467 Gene

Genes around LINC01467 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01467 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01467 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01467 Gene

Proteins for LINC01467 Gene

Post-translational modifications for LINC01467 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01467 Gene

Domains & Families for LINC01467 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01467 Gene

Function for LINC01467 Gene

Phenotypes From GWAS Catalog for LINC01467 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01467 Gene

Localization for LINC01467 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01467 Gene

Pathways & Interactions for LINC01467 Gene

PathCards logo

SuperPathways for LINC01467 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01467 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01467 Gene

Drugs & Compounds for LINC01467 Gene

No Compound Related Data Available

Transcripts for LINC01467 Gene

mRNA/cDNA for LINC01467 Gene

11 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
7 NONCODE transcripts :
3 LncBook transcripts :
5 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01467 Gene

No ASD Table

Relevant External Links for LINC01467 Gene

GeneLoc Exon Structure for
LINC01467

Expression for LINC01467 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01467 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01467

genes like me logo Genes that share expression patterns with LINC01467: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01467 Gene

Orthologs for LINC01467 Gene

Evolution for LINC01467 Gene

ENSEMBL:
Gene Tree for LINC01467 (if available)
TreeFam:
Gene Tree for LINC01467 (if available)

No data available for Orthologs for LINC01467 Gene

Paralogs for LINC01467 Gene

No data available for Paralogs for LINC01467 Gene

Variants for LINC01467 Gene

Additional dbSNP identifiers (rs#s) for LINC01467 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01467 Gene

Variant ID Type Subtype PubMed ID
esv3635076 CNV gain 21293372
esv3635091 CNV loss 21293372
nsv1052666 CNV gain 25217958
nsv475653 CNV novel sequence insertion 20440878
nsv480173 CNV novel sequence insertion 20440878
nsv565299 CNV gain 21841781

Additional Variant Information for LINC01467 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01467

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01467 Gene

Disorders for LINC01467 Gene

Additional Disease Information for LINC01467

No disorders were found for LINC01467 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01467 Gene

Publications for LINC01467 Gene

No publications were found for LINC01467 Gene.

Products for LINC01467 Gene

Sources for LINC01467 Gene