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Aliases for LINC01456 Gene

Subcategory (RNA class) for LINC01456 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC01456 Gene

  • Long Intergenic Non-Protein Coding RNA 1456 2 3 5

External Ids for LINC01456 Gene

Summaries for LINC01456 Gene

GeneCards Summary for LINC01456 Gene

LINC01456 (Long Intergenic Non-Protein Coding RNA 1456) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01456 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01456 Gene

Genomics for LINC01456 Gene

GeneHancer (GH) Regulatory Elements for LINC01456 Gene

Promoters and enhancers for LINC01456 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ018982 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 14.6 -879.7 -879702 2.8 ARNT SIN3A ZNF2 YY1 POLR2B E2F8 ZNF143 KLF13 SP3 SP5 LOC101928415 PHKA2 LINC01456
GH0XJ018098 Enhancer 0.8 ENCODE 0.4 +5.1 5115 1.5 PKNOX1 ARNT INSM2 NEUROD1 FEZF1 BMI1 GLIS2 ZNF207 FOS RCOR1 LINC01456 GC0XM017968 LOC100533712
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01456 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01456 Gene

Genomic Locations for LINC01456 Gene
chrX:17,970,167-18,104,644
(GRCh38/hg38)
Size:
134,478 bases
Orientation:
Minus strand
chrX:17,988,317-18,122,764
(GRCh37/hg19)
Size:
134,448 bases
Orientation:
Minus strand

Genomic View for LINC01456 Gene

Genes around LINC01456 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01456 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01456 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01456 Gene

Proteins for LINC01456 Gene

Post-translational modifications for LINC01456 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01456 Gene

Domains & Families for LINC01456 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01456 Gene

Function for LINC01456 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01456 Gene

Localization for LINC01456 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01456 Gene

Pathways & Interactions for LINC01456 Gene

SuperPathways for LINC01456 Gene

No Data Available

Interacting Proteins for LINC01456 Gene

Gene Ontology (GO) - Biological Process for LINC01456 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01456 Gene

Drugs & Compounds for LINC01456 Gene

No Compound Related Data Available

Transcripts for LINC01456 Gene

mRNA/cDNA for LINC01456 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01456 Gene

No ASD Table

Relevant External Links for LINC01456 Gene

GeneLoc Exon Structure for
LINC01456
ECgene alternative splicing isoforms for
LINC01456

Expression for LINC01456 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01456 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01456 Gene:

LINC01456
genes like me logo Genes that share expression patterns with LINC01456: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01456 Gene

Orthologs for LINC01456 Gene

Evolution for LINC01456 Gene

ENSEMBL:
Gene Tree for LINC01456 (if available)
TreeFam:
Gene Tree for LINC01456 (if available)

No data available for Orthologs for LINC01456 Gene

Paralogs for LINC01456 Gene

No data available for Paralogs for LINC01456 Gene

Variants for LINC01456 Gene

Sequence variations from dbSNP and Humsavar for LINC01456 Gene

SNP ID Clin Chr 0X pos Variation AA Info Type
rs1000065998 -- 18,082,529(-) G/C intron_variant
rs1000076618 -- 17,987,385(-) C/T intron_variant
rs1000114806 -- 18,035,399(-) A/G intron_variant
rs1000116797 -- 18,062,453(-) C/G intron_variant
rs1000128704 -- 18,003,076(-) G/A intron_variant

Additional Variant Information for LINC01456 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01456

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01456 Gene

Disorders for LINC01456 Gene

Additional Disease Information for LINC01456

No disorders were found for LINC01456 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01456 Gene

Publications for LINC01456 Gene

No publications were found for LINC01456 Gene.

Products for LINC01456 Gene

Sources for LINC01456 Gene

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