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Aliases for LINC01456 Gene
Subcategory (RNA class) for LINC01456 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LINC01456 Gene
External Ids for LINC01456 Gene
- HGNC: 50846
- Entrez Gene: 105373144
- Ensembl: ENSG00000225882
Previous GeneCards Identifiers for LINC01456 Gene
- GC0XM017970
Summaries for LINC01456 Gene
GeneCards Summary for LINC01456 Gene
LINC01456 (Long Intergenic Non-Protein Coding RNA 1456) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LINC01456 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01456 Gene
Genomics for LINC01456 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LINC01456 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH0XJ018103 | Promoter | 0.7 | EPDnew Ensembl | 600.7 | +0.5 | 544 | 1.8 | LINC01456 piR-52368-174 piR-57176-670 SCML1 piR-33422-465 BEND2 RAI2 | ||
| GH0XJ018098 | Enhancer | 0.8 | ENCODE | 0.4 | +5.1 | 5116 | 1.5 | CREB1 ZNF629 TARDBP ZIC2 GTF2F1 ZNF341 ATF7 ARNT HES1 ZBTB20 | LINC01456 piR-52368-174 piR-33422-465 BEND2 RAI2 | |
| GH0XJ018075 | Enhancer | 0.6 | Ensembl | 0.3 | +28.9 | 28944 | 1.4 | PRDM10 ZNF629 ZNF692 ZNF501 ZNF341 SCRT2 ZXDB OSR2 SCRT1 ZNF189 | piR-39098-286 LINC01456 piR-61101-706 BEND2 RAI2 | |
| GH0XJ018067 | Enhancer | 0.3 | Ensembl | 0.3 | +38.1 | 38144 | 0.2 | ZNF341 | piR-39098-286 LINC01456 piR-61101-706 BEND2 RAI2 | |
| GH0XJ018065 | Enhancer | 0.3 | Ensembl | 0.3 | +38.5 | 38544 | 0.2 | ZNF341 | SCML1 piR-39098-286 LINC01456 piR-61101-706 BEND2 RAI2 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC01456 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LINC01456 Gene
Genomic Locations for LINC01456 Gene
- chrX:17,894,135-18,104,645
- (GRCh38/hg38)
- Size:
- 210,511 bases
- Orientation:
- Minus strand
- chrX:17,988,317-18,122,764
- (GRCh37/hg19)
- Size:
- 134,448 bases
- Orientation:
- Minus strand
Genomic View for LINC01456 Gene
Genes around LINC01456 on UCSC Golden Path with GeneCards custom track
LINC01456 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- Xp22.13 by HGNC
- Xp22.13 by Entrez Gene
- Xp22.13 by Ensembl
LINC01456 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC01456 Gene
Proteins for LINC01456 Gene
Post-translational modifications for LINC01456 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC01456
- Origene Custom Protein Services for LINC01456
No data available for DME Specific Peptides for LINC01456 Gene
Domains & Families for LINC01456 Gene
Gene Families for LINC01456 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01456 Gene
Function for LINC01456 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LINC01456
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01456 Gene
Localization for LINC01456 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01456 Gene
Transcripts for LINC01456 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01456 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00008E399F_9606 | lncRNA | 732 | 3 |
HGNC: 50846, RefSeq: NR_133641, LNCipedia: LINC01456:5, |
| URS00003F41E9_9606 | lncRNA | 708 | 3 |
Ensembl: ENST00000453902 (view in UCSC) , LNCipedia: LINC01456:1, NONCODE: NONHSAT136412.2, |
| URS0000D5A756_9606 | lncRNA | 1251 | 2 |
LncBook: HSALNT0280636, LNCipedia: LINC01456:2, |
| URS0000D5CE61_9606 | lncRNA | 1049 | 2 |
LncBook: HSALNT0280635, LNCipedia: LINC01456:3, |
| URS0000D5AFEF_9606 | lncRNA | 887 | 2 |
LncBook: HSALNT0280634, LNCipedia: LINC01456:4, |
LINC01456 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LINC01456 Gene
- 1 NCBI additional mRNA sequence :
CRISPR Products
- Browse CRISPR knockouts for LINC01456
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LINC01456 Gene
- GeneLoc Exon Structure for
- LINC01456
Expression for LINC01456 Gene
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01456 Gene
Orthologs for LINC01456 Gene
No data available for Orthologs for LINC01456 Gene
Paralogs for LINC01456 Gene
No data available for Paralogs for LINC01456 Gene
Variants for LINC01456 Gene
Additional Variant Information for LINC01456 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC01456
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01456 Gene
Disorders for LINC01456 Gene
Additional Disease Information for LINC01456
No disorders were found for LINC01456 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01456 Gene
Publications for LINC01456 Gene
No publications were found for LINC01456 Gene.
Products for LINC01456 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC01456
- Origene Custom Protein Services for LINC01456
- Browse OriGene Inhibitory RNA Products For LINC01456
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC01456
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC01456
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC01456
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC01456
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC01456
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC01456
Sources for LINC01456 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB