Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LINC01450 Gene

Subcategory (RNA class) for LINC01450 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC01450 Gene

  • Long Intergenic Non-Protein Coding RNA 1450 2 3 5

External Ids for LINC01450 Gene

Summaries for LINC01450 Gene

GeneCards Summary for LINC01450 Gene

LINC01450 (Long Intergenic Non-Protein Coding RNA 1450) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01450 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01450 Gene

Genomics for LINC01450 Gene

GeneHancer (GH) Regulatory Elements for LINC01450 Gene

Promoters and enhancers for LINC01450 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J040985 Enhancer 1.1 FANTOM5 ENCODE 4.6 -6.6 -6629 1.8 PKNOX1 FOXA2 FEZF1 ZNF2 BRCA1 ZNF213 KLF7 FOS SP3 RXRA LINC01450 LINC01449
GH07J041002 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.3 -25.4 -25358 5.6 RAD21 RFX5 ZNF143 RCOR1 ATF7 FOS SMARCC1 ZNF654 RXRA CEBPB LINC01450 LINC01449
GH07J040977 Enhancer 0.4 ENCODE 0.7 +2.1 2141 0.2 JUND GATA3 RFX1 LINC01450 LOC105375242
GH07J041010 Enhancer 0.7 Ensembl ENCODE 0.3 -31.2 -31197 1.5 CTCF JUN IKZF1 SMC3 RAD21 SPI1 LINC01450 LINC01449
GH07J041026 Enhancer 1 Ensembl ENCODE 0.2 -48.7 -48678 3.5 INSM2 KLF17 RAD21 BRCA1 ZNF335 GLIS2 SMARCC2 RCOR1 FOS SMARCC1 INHBA INHBA-AS1 LINC01450 LINC01449
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01450 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01450 Gene

Genomic Locations for LINC01450 Gene
chr7:40,964,667-40,979,939
(GRCh38/hg38)
Size:
15,273 bases
Orientation:
Minus strand
chr7:41,004,266-41,019,537
(GRCh37/hg19)
Size:
15,272 bases
Orientation:
Minus strand

Genomic View for LINC01450 Gene

Genes around LINC01450 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01450 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01450 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01450 Gene

Proteins for LINC01450 Gene

Post-translational modifications for LINC01450 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01450 Gene

Domains & Families for LINC01450 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01450 Gene

Function for LINC01450 Gene

Phenotypes From GWAS Catalog for LINC01450 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01450 Gene

Localization for LINC01450 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01450 Gene

Pathways & Interactions for LINC01450 Gene

SuperPathways for LINC01450 Gene

No Data Available

Interacting Proteins for LINC01450 Gene

Gene Ontology (GO) - Biological Process for LINC01450 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01450 Gene

Drugs & Compounds for LINC01450 Gene

No Compound Related Data Available

Transcripts for LINC01450 Gene

mRNA/cDNA for LINC01450 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01450 Gene

No ASD Table

Relevant External Links for LINC01450 Gene

GeneLoc Exon Structure for
LINC01450
ECgene alternative splicing isoforms for
LINC01450

Expression for LINC01450 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01450 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01450 Gene:

LINC01450
genes like me logo Genes that share expression patterns with LINC01450: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01450 Gene

Orthologs for LINC01450 Gene

Evolution for LINC01450 Gene

ENSEMBL:
Gene Tree for LINC01450 (if available)
TreeFam:
Gene Tree for LINC01450 (if available)

No data available for Orthologs for LINC01450 Gene

Paralogs for LINC01450 Gene

No data available for Paralogs for LINC01450 Gene

Variants for LINC01450 Gene

Sequence variations from dbSNP and Humsavar for LINC01450 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000489500 -- 40,981,624(-) A/G upstream_transcript_variant
rs1000545997 -- 40,968,997(-) C/T intron_variant
rs1000918562 -- 40,973,626(-) A/G intron_variant
rs1000949610 -- 40,973,859(-) C/T intron_variant
rs1001123402 -- 40,969,251(-) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01450 Gene

Variant ID Type Subtype PubMed ID
nsv476034 CNV novel sequence insertion 20440878

Additional Variant Information for LINC01450 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01450

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01450 Gene

Disorders for LINC01450 Gene

Additional Disease Information for LINC01450

No disorders were found for LINC01450 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01450 Gene

Publications for LINC01450 Gene

No publications were found for LINC01450 Gene.

Products for LINC01450 Gene

Sources for LINC01450 Gene

Content
Loading form....