Aliases for LINC01444 Gene

Subcategory (RNA class) for LINC01444 Gene


Quality Score for this RNA gene is


Aliases for LINC01444 Gene

  • Long Intergenic Non-Protein Coding RNA 1444 2 3 5
  • LINC01444 2 170
  • HSALNG0120266 169
  • NONHSAG023474 94

External Ids for LINC01444 Gene

Previous GeneCards Identifiers for LINC01444 Gene

  • GC18M014971
  • GC18M015633
  • GC18M015741
  • GC18M015065
  • GC18M015149
  • GC18M015250
  • GC18M015530

Summaries for LINC01444 Gene

GeneCards Summary for LINC01444 Gene

LINC01444 (Long Intergenic Non-Protein Coding RNA 1444) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01444 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01444 Gene

Genomics for LINC01444 Gene

GeneHancer (GH) Regulatory Elements for LINC01444 Gene

Promoters and enhancers for LINC01444 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J014970 Enhancer 0.7 Ensembl ENCODE dbSUPER 750.6 -1.1 -1133 4 ZIC2 JUND GLIS1 LINC01444 ENSG00000263618 LINC01443 ENSG00000263821
GH18J014974 Enhancer 0.3 Ensembl dbSUPER 0.6 -4.3 -4333 1.2 LINC01443 ENSG00000263821 LINC01444
GH18J014962 Enhancer 0.2 Ensembl 0.4 +7.7 7667 0.4 LINC01443 LINC01444 RF00017-2630
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01444 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01444 Gene

Genomic Locations for LINC01444 Gene
6,972 bases
Minus strand
1,468 bases
Minus strand

Genomic View for LINC01444 Gene

Genes around LINC01444 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01444 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01444 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01444 Gene

Proteins for LINC01444 Gene

Post-translational modifications for LINC01444 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01444 Gene

Domains & Families for LINC01444 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01444 Gene

Function for LINC01444 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01444 Gene

Localization for LINC01444 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01444 Gene

Pathways & Interactions for LINC01444 Gene

PathCards logo

SuperPathways for LINC01444 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01444 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC01444 Gene

Drugs & Compounds for LINC01444 Gene

No Compound Related Data Available

Transcripts for LINC01444 Gene

mRNA/cDNA for LINC01444 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(7) RNACentral transcripts :
(4) LncBook transcripts :
(2) NONCODE transcripts :
(7) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01444 Gene

No ASD Table

Relevant External Links for LINC01444 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC01444 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01444 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01444 Gene:

genes like me logo Genes that share expression patterns with LINC01444: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01444 Gene

Orthologs for LINC01444 Gene

Evolution for LINC01444 Gene

Gene Tree for LINC01444 (if available)
Gene Tree for LINC01444 (if available)

No data available for Orthologs for LINC01444 Gene

Paralogs for LINC01444 Gene

No data available for Paralogs for LINC01444 Gene

Variants for LINC01444 Gene

Sequence variations from dbSNP and Humsavar for LINC01444 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs1007134236 -- 14,972,106(-) C/T upstream_transcript_variant
rs1007186518 -- 14,972,461(-) T/C upstream_transcript_variant
rs1009866328 -- 14,971,726(-) T/C upstream_transcript_variant
rs1010329383 -- 14,972,009(-) A/G upstream_transcript_variant
rs1011585541 -- 14,970,707(-) CCC/CC upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01444 Gene

Variant ID Type Subtype PubMed ID
esv2751771 CNV loss 17911159
esv2758715 CNV gain 17122850
esv2761993 CNV gain 21179565
esv33381 CNV gain 17666407
esv3641918 CNV loss 21293372
nsv576542 CNV gain 21841781
nsv576543 CNV loss 21841781
nsv961035 CNV duplication 23825009

Additional Variant Information for LINC01444 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01444 Gene

Disorders for LINC01444 Gene

Additional Disease Information for LINC01444

No disorders were found for LINC01444 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01444 Gene

Publications for LINC01444 Gene

No publications were found for LINC01444 Gene.

No data available for External Links for LINC01444 Gene

Products for LINC01444 Gene

Sources for LINC01444 Gene