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LINC01423 (Long Intergenic Non-Protein Coding RNA 1423) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH21J038333 | Promoter/Enhancer | 0.7 | EPDnew dbSUPER | 600.4 | +12.6 | 12587 | 0.1 | HNF4A SP1 | LINC01423 KCNJ15 lnc-KCNJ15-1 ERG | |
GH21J038345 | Enhancer | 0.3 | Ensembl | 600.7 | -0.1 | -124 | 0.8 | WT1 | LINC01423 KCNJ15 LOC107985513 ERG | |
GH21J038348 | Enhancer | 1.5 | FANTOM5 ENCODE CraniofacialAtlas dbSUPER | 8 | -4.9 | -4879 | 5.2 | CREB1 CTCF PRDM10 ZNF629 ZNF512 ZNF692 PRDM1 PATZ1 REST RAD21 | LOC107985513 lnc-ERG-10 HMGN1 KCNJ15 LINC01423 ETS2 ERG | |
GH21J038342 | Enhancer | 1.3 | FANTOM5 Ensembl ENCODE dbSUPER | 7.5 | +2.4 | 2415 | 1.9 | PRDM10 ZNF629 ZNF692 ZNF600 SP1 ZNF639 ZXDB CTBP1 FOXA2 TSHZ1 | KCNJ15 LINC01423 ERG lnc-KCNJ15-1 | |
GH21J038322 | Enhancer | 1.3 | FANTOM5 Ensembl ENCODE dbSUPER | 5.7 | +20.8 | 20827 | 6.2 | ATF7 PRDM10 ZNF629 IKZF1 ZNF692 PATZ1 ZNF561 SCRT2 ZBTB44 CEBPB | KCNJ15 LINC01423 lnc-KCNJ15-1 HSALNG0133057 ERG |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000075C33E_9606 | lncRNA | 621 | 5 |
HGNC: 50732, RefSeq: NR_110545, LncBook: HSALNT0273498, LNCipedia: LINC01423:1, NONCODE: NONHSAT191469.1, |
URS000025999E_9606 | lncRNA | 608 | 4 |
Ensembl: ENST00000414189 (view in UCSC) , LncBook: HSALNT0273493, LNCipedia: LINC01423:3, NONCODE: NONHSAT082087.2, |
URS000031106E_9606 | lncRNA | 423 | 4 |
Ensembl: ENST00000436845 (view in UCSC) , LncBook: HSALNT0273497, LNCipedia: LINC01423:2, NONCODE: NONHSAT082090.2, |
URS00008B90BD_9606 | lncRNA | 395 | 3 |
LncBook: HSALNT0273496, LNCipedia: LINC01423:4, NONCODE: NONHSAT082089.2, |
URS00009C377D_9606 | lncRNA | 859 | 1 |
NONCODE: NONHSAT191468.1, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
nsv1058886 | CNV | gain | 25217958 |
nsv834098 | CNV | gain | 17160897 |
No disorders were found for LINC01423 Gene.