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Aliases for LINC01423 Gene

Subcategory (RNA class) for LINC01423 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for LINC01423 Gene

  • Long Intergenic Non-Protein Coding RNA 1423 2 3 5

External Ids for LINC01423 Gene

Summaries for LINC01423 Gene

GeneCards Summary for LINC01423 Gene

LINC01423 (Long Intergenic Non-Protein Coding RNA 1423) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01423 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01423 Gene

Genomics for LINC01423 Gene

GeneHancer (GH) Regulatory Elements for LINC01423 Gene

Promoters and enhancers for LINC01423 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J038348 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 8.1 -4.9 -4879 5.2 HDGF ZNF213 ARID2 ZNF207 ZNF143 KLF7 FOS SP3 REST TSHZ1 HMGN1 KCNJ15 LINC01423 ETS2 GC21M038399 GC21M038398
GH21J038342 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 7.6 +2.4 2372 1.5 FOXA2 NFIB FEZF1 RAD21 YY1 FOS DEK RXRA OVOL3 CEBPB LINC01423 KCNJ15 ERG GC21M038327
GH21J038322 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 5.7 +21.2 21206 5.5 INSM2 MZF1 FEZF1 ZSCAN5C SCRT2 ATF7 EGR2 USF2 CEBPB ZNF398 KCNJ15 LINC01423 GC21M038327 GC21P038273
GH21J038330 Enhancer 0.3 dbSUPER 5.3 +14.6 14605 2.7 ZNF585B KCNJ15 LINC01423 GC21M038327 GC21P038273
GH21J038356 Enhancer 1.1 Ensembl ENCODE 0.4 -10.2 -10224 0.6 HDGF YBX1 GLI4 ZNF207 ZNF143 ZNF548 ZNF263 REST ZNF662 ZNF592 PSMG1 HMGN1 DYRK1A BRWD1 KCNJ15 LINC01423 GC21M038399 GC21M038398
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01423 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01423 Gene

Genomic Locations for LINC01423 Gene
22,442 bases
Minus strand
9,787 bases
Minus strand

Genomic View for LINC01423 Gene

Genes around LINC01423 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01423 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01423 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01423 Gene

Proteins for LINC01423 Gene

Post-translational modifications for LINC01423 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01423 Gene

Domains & Families for LINC01423 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01423 Gene

Function for LINC01423 Gene

Phenotypes From GWAS Catalog for LINC01423 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01423 Gene

Localization for LINC01423 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01423 Gene

Pathways & Interactions for LINC01423 Gene

SuperPathways for LINC01423 Gene

No Data Available

Interacting Proteins for LINC01423 Gene

Gene Ontology (GO) - Biological Process for LINC01423 Gene


No data available for Pathways by source and SIGNOR curated interactions for LINC01423 Gene

Drugs & Compounds for LINC01423 Gene

No Compound Related Data Available

Transcripts for LINC01423 Gene

mRNA/cDNA for LINC01423 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01423 Gene

No ASD Table

Relevant External Links for LINC01423 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for LINC01423 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01423 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01423 Gene:

genes like me logo Genes that share expression patterns with LINC01423: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01423 Gene

Orthologs for LINC01423 Gene

Evolution for LINC01423 Gene

Gene Tree for LINC01423 (if available)
Gene Tree for LINC01423 (if available)

No data available for Orthologs for LINC01423 Gene

Paralogs for LINC01423 Gene

No data available for Paralogs for LINC01423 Gene

Variants for LINC01423 Gene

Sequence variations from dbSNP and Humsavar for LINC01423 Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1000146548 -- 38,335,240(-) T/C intron_variant
rs1000188619 -- 38,328,446(-) G/C intron_variant
rs1000362555 -- 38,333,441(-) T/A intron_variant
rs1000415084 -- 38,335,072(-) C/T intron_variant
rs1000518968 -- 38,339,094(-) T/C intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01423 Gene

Variant ID Type Subtype PubMed ID
nsv1058886 CNV gain 25217958
nsv834098 CNV gain 17160897

Additional Variant Information for LINC01423 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01423 Gene

Disorders for LINC01423 Gene

Additional Disease Information for LINC01423

No disorders were found for LINC01423 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01423 Gene

Publications for LINC01423 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for LINC01423 Gene

Sources for LINC01423 Gene

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