Aliases for LINC01395 Gene
Subcategory (RNA class) for LINC01395 Gene
non-coding RNA
Quality Score for this RNA gene is
13
External Ids for LINC01395 Gene
- HGNC: 50674
- Entrez Gene: 101929557
- Ensembl: ENSG00000281097
Summaries for LINC01395 Gene
GeneCards Summary for LINC01395 Gene
LINC01395 (Long Intergenic Non-Protein Coding RNA 1395) is an RNA Gene, and is affiliated with the non-coding RNA class.
Additional gene information for LINC01395 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01395 Gene
Genomics for LINC01395 Gene
GeneHancer (GH) Regulatory Elements for LINC01395 Gene
Promoters and enhancers for LINC01395 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J129636 | Enhancer | 1.5 | FANTOM5 Ensembl ENCODE dbSUPER | 0.3 | -23.2 | -23177 | 7.9 | PKNOX1 INSM2 ZNF366 ZSCAN5C SCRT2 FOS SP3 CEBPB TSHZ1 ZEB2 | BARX2 NFRKB LINC01395 GC11P129694 | |
| GH11J129616 | Enhancer | 0.6 | dbSUPER | 0.7 | -2.1 | -2055 | 4.9 | KLF1 CEBPB FEZF1 EP300 ZIC2 OSR2 JUND ZNF629 WT1 ZBTB20 | LINC01395 GC11P129694 | |
| GH11J129608 | Enhancer | 0.6 | dbSUPER | 0.4 | +6.0 | 5987 | 6.5 | KLF1 HLF MAFG FEZF1 ZIC2 OSR2 ZNF316 NFE2 MAFK EMSY | LINC01395 ENSG00000281386 | |
| GH11J129593 | Enhancer | 0.7 | ENCODE dbSUPER | 0.3 | +23.9 | 23948 | 0.2 | GATA3 RFX1 NFIB SCRT2 NEUROD1 MNT | ENSG00000281386 LINC01395 | |
| GH11J129594 | Enhancer | 0.6 | dbSUPER | 0.3 | +22.3 | 22257 | 2 | PKNOX1 TEAD4 TAL1 ZFHX2 IKZF1 CREB1 NFE2 TRIM28 EGR2 | ENSG00000281386 LINC01395 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around LINC01395 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for LINC01395 Gene
Genomic Locations for LINC01395 Gene
- chr11:129,612,116-129,617,269
- (GRCh38/hg38)
- Size:
- 5,154 bases
- Orientation:
- Minus strand
Genomic View for LINC01395 Gene
Genes around LINC01395 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11q24.3 by Entrez Gene
- 11q24.3 by HGNC
- 11q24.3 by Ensembl
LINC01395 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC01395 Gene
Proteins for LINC01395 Gene
Post-translational modifications for LINC01395 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for LINC01395
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC01395
- Origene Custom Protein Services for LINC01395
- Search GeneTex for Proteins for LINC01395
No data available for DME Specific Peptides for LINC01395 Gene
Domains & Families for LINC01395 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01395 Gene
Function for LINC01395 Gene
Phenotypes From GWAS Catalog for LINC01395 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC01395
-
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for LINC01395
- VectorBuilder custom plasmid, inducible vectors for LINC01395
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC01395
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01395 Gene
Localization for LINC01395 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01395 Gene
Transcripts for LINC01395 Gene
mRNA/cDNA for LINC01395 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000631195 982 bps (uc058jbr.1)
- (1) RNA Central transcripts :
CRISPR Products
- Browse CRISPR knockouts for LINC01395
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for LINC01395
- VectorBuilder custom plasmid, inducible vectors for LINC01395
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC01395
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for LINC01395 Gene
NURSA nuclear receptor signaling pathways regulating expression of LINC01395 Gene:
LINC01395
No Expression Related Data Available
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01395 Gene
Orthologs for LINC01395 Gene
No data available for Orthologs for LINC01395 Gene
Paralogs for LINC01395 Gene
No data available for Paralogs for LINC01395 Gene
Variants for LINC01395 Gene
| SNP ID | Clin | Chr 11 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000343862 | -- | 129,618,255(-) | C/A | upstream_transcript_variant | |
| rs1000457480 | -- | 129,612,361(-) | T/A | non_coding_transcript_variant | |
| rs1000756293 | -- | 129,611,980(-) | C/T | downstream_transcript_variant | |
| rs1000881299 | -- | 129,617,129(-) | C/T | non_coding_transcript_variant | |
| rs1001056600 | -- | 129,615,905(-) | G/A | intron_variant |
Additional Variant Information for LINC01395 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC01395
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01395 Gene
Disorders for LINC01395 Gene
Additional Disease Information for LINC01395
No disorders were found for LINC01395 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01395 Gene
Publications for LINC01395 Gene
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
Products for LINC01395 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC01395
- Origene Custom Protein Services for LINC01395
- Browse OriGene Inhibitory RNA Products For LINC01395
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC01395
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC01395
- GenScript: Custom all cDNA clones Services for LINC01395
- GenScript Custom Purified and Recombinant Proteins Services for LINC01395
- GenScript Custom Assay Services for LINC01395
- GenScript Custom overexpressing Cell Line Services for LINC01395
- Browse GenScript CRISPR for LINC01395
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for LINC01395
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC01395
- VectorBuilder custom plasmid, inducible vectors for LINC01395
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC01395
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC01395
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC01395
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC01395
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC01395
Sources for LINC01395 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt