Aliases for LINC01370 Gene
Subcategory (RNA class) for LINC01370 Gene
non-coding RNA
Quality Score for this RNA gene is
13
Aliases for LINC01370 Gene
External Ids for LINC01370 Gene
- HGNC: 50608
- Entrez Gene: 100505663
- Ensembl: ENSG00000237767
- OMIM: 617038
Summaries for LINC01370 Gene
GeneCards Summary for LINC01370 Gene
LINC01370 (Long Intergenic Non-Protein Coding RNA 1370) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with LINC01370 include Diabetes Mellitus, Noninsulin-Dependent.
Additional gene information for LINC01370 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01370 Gene
Genomics for LINC01370 Gene
GeneHancer (GH) Regulatory Elements for LINC01370 Gene
Promoters and enhancers for LINC01370 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH20J039985 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | -18.1 | -18133 | 2.1 | PKNOX1 FOXA2 TAF1 MAX RAD21 YY1 EGR1 HNF4G MAFK CHD2 | LINC01370 GC20P039952 | |
| GH20J039960 | Enhancer | 0.3 | ENCODE | 0.3 | -43.0 | -42956 | 1.6 | POLR2A | GC20P039952 LINC01370 | |
| GH20J040010 | Enhancer | 0.2 | ENCODE | 0.4 | +6.2 | 6160 | 1.1 | LINC01370 ENSG00000233415 | ||
| GH20J040009 | Enhancer | 0.2 | ENCODE | 0.4 | +5.3 | 5253 | 0.2 | LINC01370 ENSG00000233415 | ||
| GH20J039954 | Enhancer | 0.2 | ENCODE | 0.2 | -49.8 | -49793 | 0.5 | GC20P039952 LINC01370 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around LINC01370 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for LINC01370 Gene
Genomic Locations for LINC01370 Gene
- chr20:40,004,461-40,008,529
- (GRCh38/hg38)
- Size:
- 4,069 bases
- Orientation:
- Plus strand
- chr20:38,633,103-38,637,171
- (GRCh37/hg19)
- Size:
- 4,069 bases
- Orientation:
- Plus strand
Genomic View for LINC01370 Gene
Genes around LINC01370 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 20q12 by Entrez Gene
- 20q12 by HGNC
- 20q12 by Ensembl
LINC01370 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LINC01370 Gene
Proteins for LINC01370 Gene
Post-translational modifications for LINC01370 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for LINC01370
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC01370
- Origene Custom Protein Services for LINC01370
- Search GeneTex for Proteins for LINC01370
No data available for DME Specific Peptides for LINC01370 Gene
Domains & Families for LINC01370 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01370 Gene
Function for LINC01370 Gene
Phenotypes From GWAS Catalog for LINC01370 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC01370
-
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for LINC01370
- VectorBuilder custom plasmid, inducible vectors for LINC01370
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC01370
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01370 Gene
Localization for LINC01370 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01370 Gene
Transcripts for LINC01370 Gene
mRNA/cDNA for LINC01370 Gene
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000432633 538 bps (uc032pjw.2)
- ENST00000445606 731 bps (uc032pjv.2)
- (4) RNA Central transcripts :
CRISPR Products
- Browse CRISPR knockouts for LINC01370
miRNA Products
Inhibitory RNA Products
Clone Products
- GenScript: Custom all cDNA clones Services for LINC01370
- VectorBuilder custom plasmid, inducible vectors for LINC01370
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC01370
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for LINC01370 Gene
NURSA nuclear receptor signaling pathways regulating expression of LINC01370 Gene:
LINC01370
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01370 Gene
Orthologs for LINC01370 Gene
No data available for Orthologs for LINC01370 Gene
Paralogs for LINC01370 Gene
No data available for Paralogs for LINC01370 Gene
Variants for LINC01370 Gene
| SNP ID | Clin | Chr 20 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000034928 | -- | 40,005,338(+) | C/T | intron_variant | |
| rs1000106609 | -- | 40,005,588(+) | G/T | intron_variant | |
| rs1002334125 | -- | 40,005,269(+) | A/G | intron_variant | |
| rs1002450957 | -- | 40,006,463(+) | C/G | intron_variant | |
| rs1002586339 | -- | 40,003,325(+) | A/G | upstream_transcript_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| nsv1058684 | CNV | loss | 25217958 |
| esv3645816 | CNV | loss | 21293372 |
Additional Variant Information for LINC01370 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- LINC01370
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01370 Gene
Disorders for LINC01370 Gene
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| diabetes mellitus, noninsulin-dependent |
|
Search LINC01370 in MalaCards
View complete list of genes associated with diseases
Additional Disease Information for LINC01370
No data available for UniProtKB/Swiss-Prot and Genatlas for LINC01370 Gene
Publications for LINC01370 Gene
- Human β cell transcriptome analysis uncovers lncRNAs that are tissue-specific, dynamically regulated, and abnormally expressed in type 2 diabetes. (PMID: 23040067) Morán I … Ferrer J (Cell metabolism 2012) 2 3 58
Products for LINC01370 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
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- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
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- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LINC01370
- Origene Custom Protein Services for LINC01370
- Browse OriGene Inhibitory RNA Products For LINC01370
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LINC01370
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LINC01370
- GenScript: Custom all cDNA clones Services for LINC01370
- GenScript Custom Purified and Recombinant Proteins Services for LINC01370
- GenScript Custom Assay Services for LINC01370
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- Browse GenScript CRISPR for LINC01370
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Cyagen custom Knockout/knockin (KOKI) mouse models for LINC01370
- VectorBuilder custom plasmid, inducible vectors for LINC01370
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for LINC01370
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for LINC01370
- Search GeneTex for Proteins for LINC01370
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LINC01370
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LINC01370
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LINC01370
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LINC01370
Sources for LINC01370 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt