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Aliases for LINC01365 Gene

Subcategory (RNA class) for LINC01365 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC01365 Gene

  • Long Intergenic Non-Protein Coding RNA 1365 2 3 5

External Ids for LINC01365 Gene

Summaries for LINC01365 Gene

GeneCards Summary for LINC01365 Gene

LINC01365 (Long Intergenic Non-Protein Coding RNA 1365) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01365 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01365 Gene

Genomics for LINC01365 Gene

GeneHancer (GH) Regulatory Elements for LINC01365 Gene

Promoters and enhancers for LINC01365 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J119725 Enhancer 1.2 Ensembl ENCODE 0.2 +75.9 75934 7.1 PKNOX1 FOXA2 ARNT FEZF1 ZNF2 YY1 ZNF213 FOS KLF13 SP3 LOC645513 LOC105377397 LINC01365
GH04J119733 Enhancer 0.9 VISTA Ensembl ENCODE 0.2 +69.5 69519 3.5 ZNF202 SP1 ZBTB48 FOS ZXDB TRIM28 LOC645513 PDE5A LOC105377397 LINC01365
GH04J119788 Enhancer 0.4 ENCODE 0.4 +16.0 15954 0.2 ZNF157 MAX LINC01365 LOC105377397
GH04J119774 Enhancer 0.2 ENCODE 0.3 +29.5 29474 0.2 LINC01365 LOC105377397
GH04J119835 Enhancer 0.2 ENCODE 0.3 -31.3 -31306 0.2 LINC01365 ENSG00000250183
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01365 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01365 Gene

Genomic Locations for LINC01365 Gene
chr4:119,799,089-119,804,515
(GRCh38/hg38)
Size:
5,427 bases
Orientation:
Minus strand
chr4:120,720,244-120,725,670
(GRCh37/hg19)
Size:
5,427 bases
Orientation:
Minus strand

Genomic View for LINC01365 Gene

Genes around LINC01365 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01365 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01365 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01365 Gene

Proteins for LINC01365 Gene

Post-translational modifications for LINC01365 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01365 Gene

Domains & Families for LINC01365 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01365 Gene

Function for LINC01365 Gene

Phenotypes From GWAS Catalog for LINC01365 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01365 Gene

Localization for LINC01365 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01365 Gene

Pathways & Interactions for LINC01365 Gene

SuperPathways for LINC01365 Gene

No Data Available

Interacting Proteins for LINC01365 Gene

Gene Ontology (GO) - Biological Process for LINC01365 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01365 Gene

Drugs & Compounds for LINC01365 Gene

No Compound Related Data Available

Transcripts for LINC01365 Gene

mRNA/cDNA for LINC01365 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01365 Gene

No ASD Table

Relevant External Links for LINC01365 Gene

GeneLoc Exon Structure for
LINC01365
ECgene alternative splicing isoforms for
LINC01365

Expression for LINC01365 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01365 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01365 Gene:

LINC01365
genes like me logo Genes that share expression patterns with LINC01365: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01365 Gene

Orthologs for LINC01365 Gene

Evolution for LINC01365 Gene

ENSEMBL:
Gene Tree for LINC01365 (if available)
TreeFam:
Gene Tree for LINC01365 (if available)

No data available for Orthologs for LINC01365 Gene

Paralogs for LINC01365 Gene

No data available for Paralogs for LINC01365 Gene

Variants for LINC01365 Gene

Sequence variations from dbSNP and Humsavar for LINC01365 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs10001732 -- 119,800,094(-) T/A/C intron_variant
rs1000605792 -- 119,799,630(-) C/T intron_variant
rs1000658302 -- 119,799,926(-) G/A intron_variant
rs1000677226 -- 119,801,075(-) A/C intron_variant
rs1000800272 -- 119,805,655(-) C/T upstream_transcript_variant

Additional Variant Information for LINC01365 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01365

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01365 Gene

Disorders for LINC01365 Gene

Additional Disease Information for LINC01365

No disorders were found for LINC01365 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01365 Gene

Publications for LINC01365 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LINC01365 Gene

Sources for LINC01365 Gene

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