Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LINC01362 Gene

Subcategory (RNA class) for LINC01362 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC01362 Gene

  • Long Intergenic Non-Protein Coding RNA 1362 2 3 5

External Ids for LINC01362 Gene

Summaries for LINC01362 Gene

GeneCards Summary for LINC01362 Gene

LINC01362 (Long Intergenic Non-Protein Coding RNA 1362) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01362 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01362 Gene

Genomics for LINC01362 Gene

GeneHancer (GH) Regulatory Elements for LINC01362 Gene

Promoters and enhancers for LINC01362 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J082919 Enhancer 0.7 ENCODE 0.4 +17.1 17108 1.9 JUN FEZF1 RAD21 ZNF366 ZBTB48 PRDM10 FOS KLF13 RXRA ZEB2 LINC01362 GC01P082950
GH01J083164 Enhancer 1 Ensembl ENCODE dbSUPER 0.1 +261.1 261107 0.2 SMARCE1 NCOA3 PKNOX1 NEUROD1 DPF2 MNT FOXA1 CTBP1 GATA3 POLR2A GC01M083215 GC01P083027 LINC01362
GH01J082945 Enhancer 0.3 VISTA 0.3 +42.8 42799 0.8 MNT GC01P082950 LINC01362
GH01J083102 Enhancer 0.9 ENCODE 0.1 +199.7 199740 0.2 PKNOX1 ARNT INSM2 MZF1 FEZF1 ZNF2 ZEB1 ZNF213 ZNF366 SCRT2 LINC01361 GC01P083027 GC01M083215 LINC01362
GH01J082894 Enhancer 0.2 VISTA 0.4 -8.0 -7961 0.8 GC01M082837 LINC01362
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01362 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01362 Gene

Genomic Locations for LINC01362 Gene
chr1:82,903,183-83,166,815
(GRCh38/hg38)
Size:
263,633 bases
Orientation:
Plus strand
chr1:83,368,866-83,632,498
(GRCh37/hg19)
Size:
263,633 bases
Orientation:
Plus strand

Genomic View for LINC01362 Gene

Genes around LINC01362 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01362 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01362 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01362 Gene

Proteins for LINC01362 Gene

Post-translational modifications for LINC01362 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01362 Gene

Domains & Families for LINC01362 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01362 Gene

Function for LINC01362 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01362 Gene

Localization for LINC01362 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01362 Gene

Pathways & Interactions for LINC01362 Gene

SuperPathways for LINC01362 Gene

No Data Available

Interacting Proteins for LINC01362 Gene

Gene Ontology (GO) - Biological Process for LINC01362 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01362 Gene

Drugs & Compounds for LINC01362 Gene

No Compound Related Data Available

Transcripts for LINC01362 Gene

mRNA/cDNA for LINC01362 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01362 Gene

No ASD Table

Relevant External Links for LINC01362 Gene

GeneLoc Exon Structure for
LINC01362
ECgene alternative splicing isoforms for
LINC01362

Expression for LINC01362 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01362 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01362 Gene:

LINC01362
genes like me logo Genes that share expression patterns with LINC01362: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01362 Gene

Orthologs for LINC01362 Gene

Evolution for LINC01362 Gene

ENSEMBL:
Gene Tree for LINC01362 (if available)
TreeFam:
Gene Tree for LINC01362 (if available)

No data available for Orthologs for LINC01362 Gene

Paralogs for LINC01362 Gene

No data available for Paralogs for LINC01362 Gene

Variants for LINC01362 Gene

Sequence variations from dbSNP and Humsavar for LINC01362 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000000826 -- 82,905,975(+) ACCA/A intron_variant
rs1000018125 -- 82,948,658(+) A/G intron_variant
rs1000024348 -- 82,969,066(+) A/G intron_variant
rs1000047235 -- 82,928,884(+) A/G intron_variant
rs1000060706 -- 82,954,225(+) T/G intron_variant

Additional Variant Information for LINC01362 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01362

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01362 Gene

Disorders for LINC01362 Gene

Additional Disease Information for LINC01362

No disorders were found for LINC01362 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01362 Gene

Publications for LINC01362 Gene

  1. A comprehensive survey of non-canonical splice sites in the human transcriptome. (PMID: 25123659) Parada GE … Gysling K (Nucleic acids research 2014) 3 58

Products for LINC01362 Gene

Sources for LINC01362 Gene

Content
Loading form....