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Aliases for LINC01360 Gene

Subcategory (RNA class) for LINC01360 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01360 Gene

  • Long Intergenic Non-Protein Coding RNA 1360 2 3 5

External Ids for LINC01360 Gene

Summaries for LINC01360 Gene

GeneCards Summary for LINC01360 Gene

LINC01360 (Long Intergenic Non-Protein Coding RNA 1360) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01360 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01360 Gene

Genomics for LINC01360 Gene

GeneHancer (GH) Regulatory Elements for LINC01360 Gene

Promoters and enhancers for LINC01360 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I073592 Enhancer 0.7 Ensembl ENCODE 6.5 +287.5 287540 2 JUND JUN MAX MNT ELF1 MYC LINC01360 PIR59785 LOC105378802 LOC105378801
GH01I073065 Enhancer 0.3 ENCODE 12.6 -240.5 -240455 0.7 POLR2A LINC01360 KRT8P21 ENSG00000280317
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01360 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01360 Gene

Genomic Locations for LINC01360 Gene
chr1:73,306,170-73,355,253
(GRCh38/hg38)
Size:
49,084 bases
Orientation:
Plus strand
chr1:73,771,853-73,820,934
(GRCh37/hg19)

Genomic View for LINC01360 Gene

Genes around LINC01360 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01360 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01360 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01360 Gene

Proteins for LINC01360 Gene

Post-translational modifications for LINC01360 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01360 Gene

Domains & Families for LINC01360 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01360 Gene

Function for LINC01360 Gene

Phenotypes From GWAS Catalog for LINC01360 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01360 Gene

Localization for LINC01360 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01360 Gene

Pathways & Interactions for LINC01360 Gene

SuperPathways for LINC01360 Gene

No Data Available

Interacting Proteins for LINC01360 Gene

Gene Ontology (GO) - Biological Process for LINC01360 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01360 Gene

Drugs & Compounds for LINC01360 Gene

No Compound Related Data Available

Transcripts for LINC01360 Gene

mRNA/cDNA for LINC01360 Gene

(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01360 Gene

No ASD Table

Relevant External Links for LINC01360 Gene

GeneLoc Exon Structure for
LINC01360
ECgene alternative splicing isoforms for
LINC01360

Expression for LINC01360 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01360 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01360 Gene:

LINC01360
genes like me logo Genes that share expression patterns with LINC01360: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01360 Gene

Orthologs for LINC01360 Gene

Evolution for LINC01360 Gene

ENSEMBL:
Gene Tree for LINC01360 (if available)
TreeFam:
Gene Tree for LINC01360 (if available)

No data available for Orthologs for LINC01360 Gene

Paralogs for LINC01360 Gene

No data available for Paralogs for LINC01360 Gene

Variants for LINC01360 Gene

Sequence variations from dbSNP and Humsavar for LINC01360 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000028662 -- 73,314,236(+) G/A genic_downstream_transcript_variant, intron_variant
rs1000221771 -- 73,320,731(+) T/G genic_downstream_transcript_variant, intron_variant
rs1000291577 -- 73,327,097(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000310888 -- 73,313,820(+) T/C genic_downstream_transcript_variant, intron_variant
rs1000382225 -- 73,312,178(+) C/T genic_downstream_transcript_variant, intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01360 Gene

Variant ID Type Subtype PubMed ID
esv2758942 CNV gain 17122850
esv2762076 CNV loss 21179565
esv2762152 CNV loss 21179565
esv2764157 CNV loss 21179565
esv3586433 CNV loss 21293372
esv3586434 CNV gain 21293372
esv3893712 CNV gain 25118596
nsv1002115 CNV gain 25217958
nsv1002316 CNV loss 25217958
nsv1010261 CNV loss 25217958
nsv1122364 CNV deletion 24896259
nsv461962 CNV gain 19166990
nsv546572 CNV gain 21841781

Additional Variant Information for LINC01360 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01360

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01360 Gene

Disorders for LINC01360 Gene

Additional Disease Information for LINC01360

No disorders were found for LINC01360 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01360 Gene

Publications for LINC01360 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LINC01360 Gene

Sources for LINC01360 Gene

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