LINC01359 Gene (RNA Gene)

Long Intergenic Non-Protein Coding RNA 1359

GC01M064972
GIFtS:
12
See more...

Aliases for LINC01359 Gene

Subcategory (RNA class) for LINC01359 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC01359 Gene

  • Long Intergenic Non-Protein Coding RNA 1359 2 3 5
  • LINC01359 2 5 165
  • NONHSAG001722.2 91
  • HSALNG0004173 164

External Ids for LINC01359 Gene

Summaries for LINC01359 Gene

GeneCards Summary for LINC01359 Gene

LINC01359 (Long Intergenic Non-Protein Coding RNA 1359) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01359 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01359 Gene

Genomics for LINC01359 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LINC01359 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01359 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01359 Gene

Genomic Locations for LINC01359 Gene
chr1:64,972,225-65,002,489
(GRCh38/hg38)
Size:
30,265 bases
Orientation:
Minus strand
chr1:65,437,908-65,468,159
(GRCh37/hg19)
Size:
30,252 bases
Orientation:
Minus strand

Genomic View for LINC01359 Gene

Genes around LINC01359 on UCSC Golden Path with GeneCards custom track
LINC01359 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01359 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01359 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LINC01359 Gene

Proteins for LINC01359 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LINC01359 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01359 Gene

Domains & Families for LINC01359 Gene

Gene Families for LINC01359 Gene

HGNC:
genes like me logo Genes that share domains with LINC01359: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01359 Gene

Function for LINC01359 Gene

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  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LINC01359 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01359 Gene

Localization for LINC01359 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for LINC01359 gene
Compartment Confidence
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01359 Gene

Pathways & Interactions for LINC01359 Gene

PathCards logo

SuperPathways for LINC01359 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01359 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01359 Gene

Drugs & Compounds for LINC01359 Gene

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  1. Drug
No Compound Related Data Available

Transcripts for LINC01359 Gene

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  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01359 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003F0F58_9606 lncRNA 2804 4

Ensembl: ENST00000447748 (view in UCSC) ,

LncBook: HSALNT0008266,

LNCipedia: LINC01359:9,

NONCODE: NONHSAT003716.2,

URS0000257110_9606 lncRNA 1157 3

Ensembl: ENST00000415842 (view in UCSC) ,

LNCipedia: LINC01359:2,

NONCODE: NONHSAT003717.2,

URS0000A93E13_9606 lncRNA 888 3

Ensembl: ENST00000634775 (view in UCSC) ,

LncBook: HSALNT0008269,

LNCipedia: LINC01359:4,

URS000010A1A2_9606 lncRNA 710 3

Ensembl: ENST00000436350 (view in UCSC) ,

LNCipedia: LINC01359:7,

NONCODE: NONHSAT003721.2,

URS0000A77981_9606 lncRNA 487 3

Ensembl: ENST00000634799 (view in UCSC) ,

LncBook: HSALNT0008283,

LNCipedia: LINC01359:5,

LINC01359 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01359 Gene

4 NCBI additional mRNA sequence :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01359 Gene

No ASD Table

Relevant External Links for LINC01359 Gene

GeneLoc Exon Structure for
LINC01359

Expression for LINC01359 Gene

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  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01359 Gene

mRNA expression in normal human tissues for LINC01359 Gene
mRNA expression by GTEx for LINC01359 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01359

genes like me logo Genes that share expression patterns with LINC01359: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01359 Gene

Orthologs for LINC01359 Gene

Evolution for LINC01359 Gene

ENSEMBL:
Gene Tree for LINC01359 (if available)
TreeFam:
Gene Tree for LINC01359 (if available)

No data available for Orthologs for LINC01359 Gene

Paralogs for LINC01359 Gene

No data available for Paralogs for LINC01359 Gene

Variants for LINC01359 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Additional dbSNP identifiers (rs#s) for LINC01359 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01359 Gene

Variant ID Type Subtype PubMed ID
esv2676423 CNV deletion 23128226
esv2749185 CNV deletion 23290073
nsv1165 CNV deletion 18451855
nsv830059 CNV loss 17160897
nsv945980 CNV duplication 23825009

Additional Variant Information for LINC01359 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01359

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01359 Gene

Disorders for LINC01359 Gene

Additional Disease Information for LINC01359

ATLAS of Genetics and Cytogenetics in Oncology and Haematology
Open Targets Platform

No disorders were found for LINC01359 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01359 Gene

Publications for LINC01359 Gene

  1. TSPYL5 SNPs: association with plasma estradiol concentrations and aromatase expression. (PMID: 23518928) Liu M … Weinshilboum RM (Molecular endocrinology (Baltimore, Md.) 2013) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

ExternalLinks

View latest publications for LINC01359 gene in Mastermind

Products for LINC01359 Gene

Sources for LINC01359 Gene