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Aliases for LINC01355 Gene

Subcategory (RNA class) for LINC01355 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC01355 Gene

  • Long Intergenic Non-Protein Coding RNA 1355 2 3 5

External Ids for LINC01355 Gene

Summaries for LINC01355 Gene

GeneCards Summary for LINC01355 Gene

LINC01355 (Long Intergenic Non-Protein Coding RNA 1355) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01355 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01355 Gene

Genomics for LINC01355 Gene

GeneHancer (GH) Regulatory Elements for LINC01355 Gene

Promoters and enhancers for LINC01355 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J023691 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 70.8 -405.9 -405871 3.1 HDGF FOXA2 SMAD1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 IRF4 RPL11 SRSF10 SRRM1 LINC01355 HNRNPR PNRC2 KDM1A ELOA ASAP3 GC01M023708
GH01J023521 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 43.3 -241.9 -241932 13.4 HDGF PKNOX1 SMAD1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 E2F2 GC01P023526 SRSF10 LINC01355 KDM1A HNRNPR ASAP3 ID3 ZNF436 ELOA
GH01J023553 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 26.5 -272.5 -272469 12.2 CLOCK MLX FEZF1 DMAP1 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC ID3 GC01M023559 LOC105376859 PIR53087 GC01M023560 SRSF10 LINC01355 RPL11 MDS2 E2F2
GH01J023975 Promoter/Enhancer 2.9 UCNEbase EPDnew Ensembl ENCODE dbSUPER 24.4 -692.1 -692085 6.4 CLOCK MLX DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC SRSF10 ELOA SRRM1 LINC01355 KDM1A RPL11 ZNF436-AS1 PNRC2 CNR2 RUNX3
GH01J023366 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 24.9 -82.7 -82718 6.6 FEZF1 DMAP1 YY1 E2F8 ZNF143 SP3 NFYC MEF2D SSRP1 ZNF610 ZNF436 ZNF436-AS1 GC01P023371 ENSG00000201405 KDM1A SRSF10 LINC01355 ELOA ZBTB40 RPL11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01355 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01355 Gene

Genomic Locations for LINC01355 Gene
chr1:23,281,309-23,286,752
(GRCh38/hg38)
Size:
5,444 bases
Orientation:
Minus strand
chr1:23,607,802-23,613,245
(GRCh37/hg19)
Size:
5,444 bases
Orientation:
Minus strand

Genomic View for LINC01355 Gene

Genes around LINC01355 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01355 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01355 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01355 Gene

Proteins for LINC01355 Gene

Post-translational modifications for LINC01355 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01355 Gene

Domains & Families for LINC01355 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01355 Gene

Function for LINC01355 Gene

Phenotypes From GWAS Catalog for LINC01355 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01355 Gene

Localization for LINC01355 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01355 Gene

Pathways & Interactions for LINC01355 Gene

SuperPathways for LINC01355 Gene

No Data Available

Interacting Proteins for LINC01355 Gene

Gene Ontology (GO) - Biological Process for LINC01355 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01355 Gene

Drugs & Compounds for LINC01355 Gene

No Compound Related Data Available

Transcripts for LINC01355 Gene

mRNA/cDNA for LINC01355 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01355 Gene

No ASD Table

Relevant External Links for LINC01355 Gene

GeneLoc Exon Structure for
LINC01355
ECgene alternative splicing isoforms for
LINC01355

Expression for LINC01355 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01355 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01355 Gene:

LINC01355
genes like me logo Genes that share expression patterns with LINC01355: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01355 Gene

Orthologs for LINC01355 Gene

Evolution for LINC01355 Gene

ENSEMBL:
Gene Tree for LINC01355 (if available)
TreeFam:
Gene Tree for LINC01355 (if available)

No data available for Orthologs for LINC01355 Gene

Paralogs for LINC01355 Gene

No data available for Paralogs for LINC01355 Gene

Variants for LINC01355 Gene

Sequence variations from dbSNP and Humsavar for LINC01355 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000117546 -- 23,285,702(-) T/C upstream_transcript_variant
rs1000635067 -- 23,281,522(-) T/C non_coding_transcript_variant
rs1001067823 -- 23,284,407(-) C/A non_coding_transcript_variant
rs1001328795 -- 23,284,864(-) G/C intron_variant
rs1002990824 -- 23,285,151(-) AAAAAAA/AAAAAAAA non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01355 Gene

Variant ID Type Subtype PubMed ID
nsv6631 CNV insertion 18451855
nsv509047 CNV insertion 20534489

Additional Variant Information for LINC01355 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01355

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01355 Gene

Disorders for LINC01355 Gene

Additional Disease Information for LINC01355

No disorders were found for LINC01355 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01355 Gene

Publications for LINC01355 Gene

No publications were found for LINC01355 Gene.

Products for LINC01355 Gene

Sources for LINC01355 Gene

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