Aliases for LINC01353 Gene

Subcategory (RNA class) for LINC01353 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for LINC01353 Gene

  • Long Intergenic Non-Protein Coding RNA 1353 2 3 5
  • LINC01353 2 170
  • HSALNG0009782 169
  • NONHSAG003990 94

External Ids for LINC01353 Gene

Summaries for LINC01353 Gene

GeneCards Summary for LINC01353 Gene

LINC01353 (Long Intergenic Non-Protein Coding RNA 1353) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01353 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01353 Gene

Genomics for LINC01353 Gene

GeneHancer (GH) Regulatory Elements for LINC01353 Gene

Promoters and enhancers for LINC01353 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01353 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01353 Gene

Genomic Locations for LINC01353 Gene
chr1:203,273,221-203,292,259
(GRCh38/hg38)
Size:
19,039 bases
Orientation:
Plus strand
chr1:203,256,280-203,257,929
(GRCh37/hg19)
Size:
1,650 bases
Orientation:
Plus strand

Genomic View for LINC01353 Gene

Genes around LINC01353 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01353 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01353 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01353 Gene

Proteins for LINC01353 Gene

Post-translational modifications for LINC01353 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01353 Gene

Domains & Families for LINC01353 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01353 Gene

Function for LINC01353 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01353 Gene

Localization for LINC01353 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01353 Gene

Pathways & Interactions for LINC01353 Gene

PathCards logo

SuperPathways for LINC01353 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01353 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01353 Gene

Drugs & Compounds for LINC01353 Gene

No Compound Related Data Available

Transcripts for LINC01353 Gene

mRNA/cDNA for LINC01353 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(18) RNACentral transcripts :
(3) NONCODE transcripts :
(9) LncBook transcripts :
(15) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01353 Gene

No ASD Table

Relevant External Links for LINC01353 Gene

GeneLoc Exon Structure for
LINC01353
ECgene alternative splicing isoforms for
LINC01353

Expression for LINC01353 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01353 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01353 Gene:

LINC01353
genes like me logo Genes that share expression patterns with LINC01353: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01353 Gene

Orthologs for LINC01353 Gene

Evolution for LINC01353 Gene

ENSEMBL:
Gene Tree for LINC01353 (if available)
TreeFam:
Gene Tree for LINC01353 (if available)

No data available for Orthologs for LINC01353 Gene

Paralogs for LINC01353 Gene

No data available for Paralogs for LINC01353 Gene

Variants for LINC01353 Gene

Sequence variations from dbSNP and Humsavar for LINC01353 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000124737 -- 203,286,205(+) T/C upstream_transcript_variant
rs1001947987 -- 203,288,530(+) G/A non_coding_transcript_variant
rs1002613697 -- 203,285,567(+) C/T upstream_transcript_variant
rs1006276020 -- 203,289,090(+) C/T downstream_transcript_variant
rs1007684892 -- 203,288,918(+) C/T downstream_transcript_variant

Additional Variant Information for LINC01353 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01353

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01353 Gene

Disorders for LINC01353 Gene

Additional Disease Information for LINC01353

No disorders were found for LINC01353 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01353 Gene

Publications for LINC01353 Gene

No publications were found for LINC01353 Gene.

No data available for External Links for LINC01353 Gene

Products for LINC01353 Gene

Sources for LINC01353 Gene