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Aliases for LINC01351 Gene

Subcategory (RNA class) for LINC01351 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01351 Gene

  • Long Intergenic Non-Protein Coding RNA 1351 2 3 5

External Ids for LINC01351 Gene

Summaries for LINC01351 Gene

GeneCards Summary for LINC01351 Gene

LINC01351 (Long Intergenic Non-Protein Coding RNA 1351) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01351 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01351 Gene

Genomics for LINC01351 Gene

GeneHancer (GH) Regulatory Elements for LINC01351 Gene

Promoters and enhancers for LINC01351 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I190473 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 550.8 -1.5 -1490 6.2 CTCF MXI1 PKNOX1 NEUROD1 SIN3A ZNF384 EBF1 CEBPG BMI1 CTBP1 BRINP3 LINC01351 GC01M190277
GH01I190459 Promoter 0.5 EPDnew 0.4 -18.5 -18480 0.1 BRINP3 GC01M190277 LINC01351
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01351 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01351 Gene

Genomic Locations for LINC01351 Gene
chr1:190,478,260-190,481,394
(GRCh38/hg38)
Size:
3,135 bases
Orientation:
Plus strand
chr1:190,447,681-190,449,865
(GRCh37/hg19)

Genomic View for LINC01351 Gene

Genes around LINC01351 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01351 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01351 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01351 Gene

Proteins for LINC01351 Gene

Post-translational modifications for LINC01351 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01351 Gene

Domains & Families for LINC01351 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01351 Gene

Function for LINC01351 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01351 Gene

Localization for LINC01351 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01351 Gene

Pathways & Interactions for LINC01351 Gene

SuperPathways for LINC01351 Gene

No Data Available

Interacting Proteins for LINC01351 Gene

Gene Ontology (GO) - Biological Process for LINC01351 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01351 Gene

Drugs & Compounds for LINC01351 Gene

No Compound Related Data Available

Transcripts for LINC01351 Gene

mRNA/cDNA for LINC01351 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01351 Gene

No ASD Table

Relevant External Links for LINC01351 Gene

GeneLoc Exon Structure for
LINC01351
ECgene alternative splicing isoforms for
LINC01351

Expression for LINC01351 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01351 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01351 Gene:

LINC01351
genes like me logo Genes that share expression patterns with LINC01351: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01351 Gene

Orthologs for LINC01351 Gene

Evolution for LINC01351 Gene

ENSEMBL:
Gene Tree for LINC01351 (if available)
TreeFam:
Gene Tree for LINC01351 (if available)

No data available for Orthologs for LINC01351 Gene

Paralogs for LINC01351 Gene

No data available for Paralogs for LINC01351 Gene

Variants for LINC01351 Gene

Sequence variations from dbSNP and Humsavar for LINC01351 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000580679 -- 190,479,026(+) C/G intron_variant
rs1001178808 -- 190,480,317(+) T/C intron_variant
rs1001220830 -- 190,479,982(+) T/G intron_variant
rs1001425400 -- 190,477,714(+) G/C upstream_transcript_variant
rs1002138404 -- 190,481,577(+) A/G downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01351 Gene

Variant ID Type Subtype PubMed ID
dgv50n27 CNV loss 19166990
dgv695n54 CNV loss 21841781
nsv548552 CNV loss 21841781

Additional Variant Information for LINC01351 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01351

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01351 Gene

Disorders for LINC01351 Gene

Additional Disease Information for LINC01351

No disorders were found for LINC01351 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01351 Gene

Publications for LINC01351 Gene

No publications were found for LINC01351 Gene.

Products for LINC01351 Gene

Sources for LINC01351 Gene

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