Aliases for LINC01336 Gene

Subcategory (RNA class) for LINC01336 Gene

lncRNA

Quality Score for this RNA gene is

11

Aliases for LINC01336 Gene

  • LINC01336 170

No data available for External Ids for LINC01336 Gene

Summaries for LINC01336 Gene

GeneCards Summary for LINC01336 Gene

LINC01336 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01336 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01336 Gene

Genomics for LINC01336 Gene

GeneHancer (GH) Regulatory Elements for LINC01336 Gene

Promoters and enhancers for LINC01336 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J075049 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +0.4 381 7.2 ZNF785 CTCF ZBTB6 ZNF362 HLF RAD21 NFIB SP1 BCL6B ELF3 GCNT4 LINC01336 ANKRD31 ENSG00000242198 RF00017-4726
GH05J075057 Enhancer 0.8 FANTOM5 ENCODE dbSUPER 0.4 -5.6 -5620 4.6 SP7 FOXA2 GATA3 ZNF664 GCNT4 ANKRD31 ANKDD1B FAM169A LINC01336 piR-34009-021 RF00017-4726
GH05J075062 Enhancer 0.4 dbSUPER 0.4 -9.0 -8980 1.5 RXRA NR2C1 NR2C2 NR2F2 piR-34009-021 LINC01336 RF00017-4726
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01336 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01336 Gene

Genomic Locations for LINC01336 Gene
chr5:75,053,307-75,053,797
(GRCh38/hg38)
Size:
491 bases
Orientation:
Minus strand

Genomic View for LINC01336 Gene

Genes around LINC01336 on UCSC Golden Path with GeneCards custom track

LINC01336 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01336 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for LINC01336 Gene

Proteins for LINC01336 Gene

Post-translational modifications for LINC01336 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01336 Gene

Domains & Families for LINC01336 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01336 Gene

Function for LINC01336 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01336 Gene

Localization for LINC01336 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01336 Gene

Pathways & Interactions for LINC01336 Gene

PathCards logo

SuperPathways for LINC01336 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01336 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01336 Gene

Drugs & Compounds for LINC01336 Gene

No Compound Related Data Available

Transcripts for LINC01336 Gene

mRNA/cDNA for LINC01336 Gene

(1) RNACentral transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01336 Gene

No ASD Table

Relevant External Links for LINC01336 Gene

GeneLoc Exon Structure for
LINC01336

Expression for LINC01336 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01336 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01336 Gene:

LINC01336
genes like me logo Genes that share expression patterns with LINC01336: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01336 Gene

Orthologs for LINC01336 Gene

No data available for Orthologs and Evolution for LINC01336 Gene

Paralogs for LINC01336 Gene

No data available for Paralogs for LINC01336 Gene

Variants for LINC01336 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LINC01336 Gene

Disorders for LINC01336 Gene

No disorders were found for LINC01336 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01336 Gene

Publications for LINC01336 Gene

No publications were found for LINC01336 Gene.

No data available for External Links for LINC01336 Gene

Products for LINC01336 Gene

Sources for LINC01336 Gene