Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LINC01332 Gene

Subcategory (RNA class) for LINC01332 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC01332 Gene

  • Long Intergenic Non-Protein Coding RNA 1332 2 3 5
  • TCONS_00009701 3

External Ids for LINC01332 Gene

Summaries for LINC01332 Gene

GeneCards Summary for LINC01332 Gene

LINC01332 (Long Intergenic Non-Protein Coding RNA 1332) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01332 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01332 Gene

Genomics for LINC01332 Gene

GeneHancer (GH) Regulatory Elements for LINC01332 Gene

Promoters and enhancers for LINC01332 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J074326 Enhancer 1.2 Ensembl ENCODE 0.4 +7.1 7144 2.5 ATF1 PKNOX1 SMAD1 FEZF1 ZNF2 ZNF207 ATF7 FOS RUNX3 JUNB ANKRA2 LINC01333 LINC01332 ENSG00000251041
GH05J074337 Enhancer 0.5 ENCODE 0.7 -3.0 -3042 1.3 MYNN ZNF26 REST SP7 ANKRA2 UTP15 BTF3 LINC01332 ENSG00000251041 GC05M074433
GH05J074404 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.2 -72.7 -72743 5.7 HDAC1 ELF3 PKNOX1 FOXA2 MLX ARID4B ZBTB40 RAD21 RARA ZNF766 LINC01333 BTF3 ENC1 GC05M074433 LINC01332 LINC01331
GH05J074390 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.2 -59.6 -59623 6.8 ZNF133 FEZF1 ZNF2 RUNX3 RXRA NFYC TSHZ1 REST ZNF518A GLIS1 BTF3 LINC01333 GC05M074433 LINC01332 LINC01331
GH05J074412 Enhancer 1.1 ENCODE dbSUPER 0.2 -81.1 -81120 6.1 PKNOX1 FOXA2 ZFP64 ARID4B YY1 TCF12 NFKBIZ RXRA PPARG KAT8 LINC01333 BTF3 GC05M074433 LINC01332 LINC01331
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01332 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01332 Gene

Genomic Locations for LINC01332 Gene
chr5:74,327,995-74,334,766
(GRCh38/hg38)
Size:
6,772 bases
Orientation:
Minus strand
chr5:73,623,820-73,630,591
(GRCh37/hg19)
Size:
6,772 bases
Orientation:
Minus strand

Genomic View for LINC01332 Gene

Genes around LINC01332 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01332 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01332 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LINC01332 Gene

Proteins for LINC01332 Gene

Post-translational modifications for LINC01332 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01332 Gene

Domains & Families for LINC01332 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01332 Gene

Function for LINC01332 Gene

Phenotypes From GWAS Catalog for LINC01332 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01332 Gene

Localization for LINC01332 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01332 Gene

Pathways & Interactions for LINC01332 Gene

SuperPathways for LINC01332 Gene

No Data Available

Interacting Proteins for LINC01332 Gene

Gene Ontology (GO) - Biological Process for LINC01332 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01332 Gene

Drugs & Compounds for LINC01332 Gene

No Compound Related Data Available

Transcripts for LINC01332 Gene

mRNA/cDNA for LINC01332 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01332 Gene

No ASD Table

Relevant External Links for LINC01332 Gene

GeneLoc Exon Structure for
LINC01332
ECgene alternative splicing isoforms for
LINC01332

Expression for LINC01332 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01332 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01332 Gene:

LINC01332
genes like me logo Genes that share expression patterns with LINC01332: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01332 Gene

Orthologs for LINC01332 Gene

Evolution for LINC01332 Gene

ENSEMBL:
Gene Tree for LINC01332 (if available)
TreeFam:
Gene Tree for LINC01332 (if available)

No data available for Orthologs for LINC01332 Gene

Paralogs for LINC01332 Gene

No data available for Paralogs for LINC01332 Gene

Variants for LINC01332 Gene

Additional Variant Information for LINC01332 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01332

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01332 Gene

Disorders for LINC01332 Gene

No disorders were found for LINC01332 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01332 Gene

Publications for LINC01332 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for LINC01332 Gene

Sources for LINC01332 Gene

Content
Loading form....