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Aliases for LINC01327 Gene

Subcategory (RNA class) for LINC01327 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01327 Gene

  • Long Intergenic Non-Protein Coding RNA 1327 2 3 5
  • TCONS_00005644 3

External Ids for LINC01327 Gene

Summaries for LINC01327 Gene

GeneCards Summary for LINC01327 Gene

LINC01327 (Long Intergenic Non-Protein Coding RNA 1327) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01327 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01327 Gene

Genomics for LINC01327 Gene

GeneHancer (GH) Regulatory Elements for LINC01327 Gene

Promoters and enhancers for LINC01327 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I167463 Enhancer 0.2 FANTOM5 0.2 +71.1 71146 0.2 ZBBX SERPINI2 LOC105374197 LINC01327
GH03I167456 Enhancer 0.2 FANTOM5 0.2 +63.8 63770 0.3 SERPINI1 LOC105374197 SERPINI2 LINC01327
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01327 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01327 Gene

Genomic Locations for LINC01327 Gene
chr3:167,392,796-167,408,519
(GRCh38/hg38)
Size:
15,724 bases
Orientation:
Plus strand
chr3:167,110,584-167,126,307
(GRCh37/hg19)

Genomic View for LINC01327 Gene

Genes around LINC01327 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01327 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01327 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01327 Gene

Proteins for LINC01327 Gene

Post-translational modifications for LINC01327 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01327 Gene

Domains & Families for LINC01327 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01327 Gene

Function for LINC01327 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01327 Gene

Localization for LINC01327 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01327 Gene

Pathways & Interactions for LINC01327 Gene

SuperPathways for LINC01327 Gene

No Data Available

Interacting Proteins for LINC01327 Gene

Gene Ontology (GO) - Biological Process for LINC01327 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01327 Gene

Drugs & Compounds for LINC01327 Gene

No Compound Related Data Available

Transcripts for LINC01327 Gene

mRNA/cDNA for LINC01327 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01327 Gene

No ASD Table

Relevant External Links for LINC01327 Gene

GeneLoc Exon Structure for
LINC01327
ECgene alternative splicing isoforms for
LINC01327

Expression for LINC01327 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01327 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01327 Gene:

LINC01327
genes like me logo Genes that share expression patterns with LINC01327: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01327 Gene

Orthologs for LINC01327 Gene

Evolution for LINC01327 Gene

ENSEMBL:
Gene Tree for LINC01327 (if available)
TreeFam:
Gene Tree for LINC01327 (if available)

No data available for Orthologs for LINC01327 Gene

Paralogs for LINC01327 Gene

No data available for Paralogs for LINC01327 Gene

Variants for LINC01327 Gene

Sequence variations from dbSNP and Humsavar for LINC01327 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000138079 -- 167,393,773(+) T/C intron_variant
rs1000325602 -- 167,399,327(+) A/G intron_variant
rs1000400843 -- 167,399,687(+) G/C intron_variant
rs1000480240 -- 167,393,240(+) G/A intron_variant
rs1000865004 -- 167,393,446(+) G/A intron_variant

Additional Variant Information for LINC01327 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01327

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01327 Gene

Disorders for LINC01327 Gene

Additional Disease Information for LINC01327

No disorders were found for LINC01327 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01327 Gene

Publications for LINC01327 Gene

No publications were found for LINC01327 Gene.

Products for LINC01327 Gene

Sources for LINC01327 Gene

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