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Aliases for LINC01320 Gene

Subcategory (RNA class) for LINC01320 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01320 Gene

  • Long Intergenic Non-Protein Coding RNA 1320 2 3 5

External Ids for LINC01320 Gene

Summaries for LINC01320 Gene

GeneCards Summary for LINC01320 Gene

LINC01320 (Long Intergenic Non-Protein Coding RNA 1320) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01320 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01320 Gene

Genomics for LINC01320 Gene

GeneHancer (GH) Regulatory Elements for LINC01320 Gene

Promoters and enhancers for LINC01320 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I034734 Enhancer 0.3 ENCODE 6.4 +57.4 57352 1 POU5F1 LOC105374458 LINC01320 ENSG00000232153 ENSG00000272027
GH02I034687 Enhancer 0.2 FANTOM5 0.4 +9.8 9772 0.2 LINC01320 ENSG00000272027
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01320 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01320 Gene

Genomic Locations for LINC01320 Gene
chr2:34,677,555-34,738,231
(GRCh38/hg38)
Size:
60,677 bases
Orientation:
Plus strand
chr2:34,902,646-34,963,298
(GRCh37/hg19)

Genomic View for LINC01320 Gene

Genes around LINC01320 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01320 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01320 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01320 Gene

Proteins for LINC01320 Gene

Post-translational modifications for LINC01320 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01320 Gene

Domains & Families for LINC01320 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01320 Gene

Function for LINC01320 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01320 Gene

Localization for LINC01320 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01320 Gene

Pathways & Interactions for LINC01320 Gene

SuperPathways for LINC01320 Gene

No Data Available

Interacting Proteins for LINC01320 Gene

Gene Ontology (GO) - Biological Process for LINC01320 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01320 Gene

Drugs & Compounds for LINC01320 Gene

No Compound Related Data Available

Transcripts for LINC01320 Gene

mRNA/cDNA for LINC01320 Gene

(16) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01320 Gene

No ASD Table

Relevant External Links for LINC01320 Gene

GeneLoc Exon Structure for
LINC01320
ECgene alternative splicing isoforms for
LINC01320

Expression for LINC01320 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01320 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01320 Gene:

LINC01320
genes like me logo Genes that share expression patterns with LINC01320: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01320 Gene

Orthologs for LINC01320 Gene

Evolution for LINC01320 Gene

ENSEMBL:
Gene Tree for LINC01320 (if available)
TreeFam:
Gene Tree for LINC01320 (if available)

No data available for Orthologs for LINC01320 Gene

Paralogs for LINC01320 Gene

No data available for Paralogs for LINC01320 Gene

Variants for LINC01320 Gene

Sequence variations from dbSNP and Humsavar for LINC01320 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000016237 -- 34,675,872(+) A/G upstream_transcript_variant
rs1000018407 -- 34,711,828(+) A/G intron_variant
rs1000072007 -- 34,684,741(+) A/G intron_variant
rs1000170898 -- 34,717,006(+) T/G intron_variant
rs1000176668 -- 34,688,869(+) A/G intron_variant

Additional Variant Information for LINC01320 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01320

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01320 Gene

Disorders for LINC01320 Gene

Additional Disease Information for LINC01320

No disorders were found for LINC01320 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01320 Gene

Publications for LINC01320 Gene

No publications were found for LINC01320 Gene.

Products for LINC01320 Gene

Sources for LINC01320 Gene

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