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Aliases for LINC01303 Gene

Subcategory (RNA class) for LINC01303 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC01303 Gene

  • Long Intergenic Non-Protein Coding RNA 1303 2 3 5

External Ids for LINC01303 Gene

Summaries for LINC01303 Gene

GeneCards Summary for LINC01303 Gene

LINC01303 (Long Intergenic Non-Protein Coding RNA 1303) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01303 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01303 Gene

Genomics for LINC01303 Gene

GeneHancer (GH) Regulatory Elements for LINC01303 Gene

Promoters and enhancers for LINC01303 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J061544 Promoter/Enhancer 1.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 15.7 +23.4 23357 5.7 SOX5 SOX13 PKNOX1 RXRA HLF CEBPB CEBPG EP300 TEAD3 NFIL3 PRKCH LOC105370525 LINC01303 ENSG00000232774 HIF1A ENSG00000258989 FLJ22447
GH14J061468 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 15.9 +93.0 93010 17.7 PKNOX1 CLOCK FOXA2 NEUROD1 SIN3A FEZF1 ZNF2 YY1 ZNF213 ZNF143 HIF1A LINC01303 SNAPC1 ENSG00000232774 HIF1A-AS1 PRKCH GC14M061347 ENSG00000247287
GH14J061593 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 12.5 -24.0 -24004 2.9 HDGF ZSCAN4 BATF ZNF207 ATF7 IKZF2 RUNX3 CREM SMARCA5 ZNF362 HIF1A LINC01303 ENSG00000232774 GC14P061590 FLJ22447 ENSG00000258989 GC14P061694
GH14J061510 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.7 +56.4 56436 8.4 PKNOX1 FOXA2 NEUROD1 ZNF48 YY1 RXRA ZC3H11A KAT8 SSRP1 RCOR2 HIF1A LINC01303 ENSG00000232774 PRKCH SYT16 ENSG00000258989 GC14M061347
GH14J061530 Enhancer 1.4 Ensembl ENCODE dbSUPER 12 +35.6 35552 9.3 PKNOX1 CLOCK FOXA2 MLX ARID4B NEUROD1 SIN3A ZBTB7B E2F8 ZNF207 HIF1A LINC01303 ENSG00000232774 ENSG00000258989 LOC105370525 PRKCH
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01303 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01303 Gene

Genomic Locations for LINC01303 Gene
chr14:61,556,272-61,570,653
(GRCh38/hg38)
Size:
14,382 bases
Orientation:
Minus strand
chr14:62,023,031-62,037,371
(GRCh37/hg19)
Size:
14,341 bases
Orientation:
Minus strand

Genomic View for LINC01303 Gene

Genes around LINC01303 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01303 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01303 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01303 Gene

Proteins for LINC01303 Gene

Post-translational modifications for LINC01303 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01303 Gene

Domains & Families for LINC01303 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01303 Gene

Function for LINC01303 Gene

Phenotypes From GWAS Catalog for LINC01303 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01303 Gene

Localization for LINC01303 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01303 Gene

Pathways & Interactions for LINC01303 Gene

SuperPathways for LINC01303 Gene

No Data Available

Interacting Proteins for LINC01303 Gene

Gene Ontology (GO) - Biological Process for LINC01303 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01303 Gene

Drugs & Compounds for LINC01303 Gene

No Compound Related Data Available

Transcripts for LINC01303 Gene

mRNA/cDNA for LINC01303 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01303 Gene

No ASD Table

Relevant External Links for LINC01303 Gene

GeneLoc Exon Structure for
LINC01303
ECgene alternative splicing isoforms for
LINC01303

Expression for LINC01303 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01303 Gene

Orthologs for LINC01303 Gene

Evolution for LINC01303 Gene

ENSEMBL:
Gene Tree for LINC01303 (if available)
TreeFam:
Gene Tree for LINC01303 (if available)

No data available for Orthologs for LINC01303 Gene

Paralogs for LINC01303 Gene

No data available for Paralogs for LINC01303 Gene

Variants for LINC01303 Gene

Sequence variations from dbSNP and Humsavar for LINC01303 Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1000097157 -- 61,560,128(-) C/A intron_variant
rs1000128276 -- 61,559,850(-) C/T intron_variant
rs1000290604 -- 61,566,614(-) T/G intron_variant
rs1000653749 -- 61,571,580(-) A/G upstream_transcript_variant
rs1000686289 -- 61,571,876(-) T/C upstream_transcript_variant

Additional Variant Information for LINC01303 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01303

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01303 Gene

Disorders for LINC01303 Gene

No disorders were found for LINC01303 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01303 Gene

Publications for LINC01303 Gene

No publications were found for LINC01303 Gene.

Products for LINC01303 Gene

Sources for LINC01303 Gene

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