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LINC01290 (Long Intergenic Non-Protein Coding RNA 1290) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH16J011219 | Enhancer | 0.4 | dbSUPER | 12.5 | -692.5 | -692536 | 1.7 | MCM3 TSC22D4 ZNF776 RUNX3 | HNRNPCP4 RMI2 RSL1D1-DT ENSG00000261560 COX6CP1 LINC01290 TNP2 PRM3 ENSG00000212228 PRM2 | |
GH16J010520 | Enhancer | 1 | Ensembl ENCODE | 0.4 | +7.7 | 7740 | 1.3 | CHD2 CEBPA ELF1 KDM6A THAP11 FOXA2 MAFF SMAD4 SAP130 RXRA | EMP2 HSALNG0109527 HSALNG0109528 LINC01290 ATF7IP2 | |
GH16J010521 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | +5.7 | 5674 | 1.7 | ZNF217 CTCF CEBPB REST MAX TRIM22 SAP130 ZNF341 SMC3 RAD21 | HSALNG0109528 EMP2 HSALNG0109527 LINC01290 ATF7IP2 | |
GH16J010514 | Enhancer | 0.9 | Ensembl ENCODE | 0.4 | +13.3 | 13267 | 1.3 | CEBPA CTCF CEBPB REST FOXA2 TRIM22 MAFF SMAD4 RXRA ZBTB33 | EMP2 HSALNG0109527 piR-50444-141 LINC01290 ATF7IP2 | |
GH16J010516 | Enhancer | 0.2 | Ensembl | 0.4 | +12.1 | 12101 | 0.2 | EMP2 HSALNG0109527 piR-50444-141 LINC01290 ATF7IP2 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS00000544C1_9606 | lncRNA | 504 | 4 |
Ensembl: ENST00000566787 (view in UCSC) , LncBook: HSALNT0227620, LNCipedia: LINC01290:1, NONCODE: NONHSAT140510.2, |
URS0000BC45FA_9606 | lncRNA | 497 | 1 |
RefSeq: NR_149081, |
URS00008BC8D2_9606 | lncRNA | 399 | 3 |
LncBook: HSALNT0227622, LNCipedia: LINC01290:2, NONCODE: NONHSAT140511.2, |
URS0001BE87C1_9606 | lncRNA | 502 | 1 |
LncBook: HSALNT0227620, |
URS0001BDEAFD_9606 | lncRNA | 399 | 1 |
LncBook: HSALNT0227622, |
No disorders were found for LINC01290 Gene.