Aliases for LINC01283 Gene

Subcategory (RNA class) for LINC01283 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01283 Gene

  • Long Intergenic Non-Protein Coding RNA 1283 2 3 5
  • HSALNG0137357 167
  • NONHSAG054260 92
  • Lnc-BCOR-2 168
  • LINC01283 2

External Ids for LINC01283 Gene

Summaries for LINC01283 Gene

GeneCards Summary for LINC01283 Gene

LINC01283 (Long Intergenic Non-Protein Coding RNA 1283) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01283 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01283 Gene

Genomics for LINC01283 Gene

GeneHancer (GH) Regulatory Elements for LINC01283 Gene

Promoters and enhancers for LINC01283 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ039434 Enhancer 0.8 FANTOM5 Ensembl ENCODE 500.7 -1.1 -1075 3 RBM25 ZNF585B ZMYM3 LINC01283 LINC01281 HSALNG0137357
GH0XJ039433 Enhancer 0.2 FANTOM5 500.7 +0.9 862 0.2 LINC01283 LINC01281 piR-31199-388
GH0XJ039439 Enhancer 0.8 Ensembl ENCODE 0.4 -6.3 -6276 3.4 CTCF ATF2 IRF1 PBX2 IRF2 TAL1 IKZF1 PRDM10 RAD21 MEIS2 LINC01281 LINC01283 HSALNG0137357
GH0XJ039476 Enhancer 1.2 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.3 -42.1 -42075 4.2 CTCF ZNF316 MAX ZNF592 NFE2 ZFHX2 IKZF1 MAFG RAD21 NR2F6 HSALNG0137357 LINC01283
GH0XJ039427 Enhancer 0.7 FANTOM5 Ensembl ENCODE 0.4 +7.0 7024 2 MEF2B FOS LINC01281 LINC01283 piR-31199-388
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01283 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01283 Gene

Genomic Locations for LINC01283 Gene
chrX:39,398,762-39,434,825
(GRCh38/hg38)
Size:
36,064 bases
Orientation:
Minus strand
chrX:39,260,506-39,294,078
(GRCh37/hg19)
Size:
33,573 bases
Orientation:
Minus strand

Genomic View for LINC01283 Gene

Genes around LINC01283 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01283 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01283 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01283 Gene

Proteins for LINC01283 Gene

Post-translational modifications for LINC01283 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01283 Gene

Domains & Families for LINC01283 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01283 Gene

Function for LINC01283 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01283 Gene

Localization for LINC01283 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01283 Gene

Pathways & Interactions for LINC01283 Gene

PathCards logo

SuperPathways for LINC01283 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01283 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01283 Gene

Drugs & Compounds for LINC01283 Gene

No Compound Related Data Available

Transcripts for LINC01283 Gene

mRNA/cDNA for LINC01283 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01283 Gene

No ASD Table

Relevant External Links for LINC01283 Gene

GeneLoc Exon Structure for
LINC01283

Expression for LINC01283 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01283 Gene

Orthologs for LINC01283 Gene

Evolution for LINC01283 Gene

ENSEMBL:
Gene Tree for LINC01283 (if available)
TreeFam:
Gene Tree for LINC01283 (if available)

No data available for Orthologs for LINC01283 Gene

Paralogs for LINC01283 Gene

No data available for Paralogs for LINC01283 Gene

Variants for LINC01283 Gene

Additional dbSNP identifiers (rs#s) for LINC01283 Gene

Additional Variant Information for LINC01283 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01283

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01283 Gene

Disorders for LINC01283 Gene

No disorders were found for LINC01283 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LINC01283 Gene

Publications for LINC01283 Gene

No publications were found for LINC01283 Gene.

No data available for Mastermind for LINC01283 Gene

Products for LINC01283 Gene

Sources for LINC01283 Gene