Aliases for LINC01265 Gene

Subcategory (RNA class) for LINC01265 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC01265 Gene

  • Long Intergenic Non-Protein Coding RNA 1265 2 3
  • OSMR Antisense RNA 1 (Head To Head) 5
  • NONHSAG040233 92
  • Lnc-RICTOR-54 168
  • HSALNG0041285 167
  • HSALNG0041295 167
  • NONHSAG040232 92
  • HSALNG0041294 167
  • LINC01265 2
  • OSMR-AS1 5

External Ids for LINC01265 Gene

Summaries for LINC01265 Gene

GeneCards Summary for LINC01265 Gene

LINC01265 (Long Intergenic Non-Protein Coding RNA 1265) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01265 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01265 Gene

Genomics for LINC01265 Gene

GeneHancer (GH) Regulatory Elements for LINC01265 Gene

Promoters and enhancers for LINC01265 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J038843 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.4 -437 5.1 ZNF217 TCF12 POLR2G PHF8 JUND FOS ZFX ZIC2 POLR2A CLOCK OSMR LINC01265 OSMR-AS1 RICTOR piR-57337-036
GH05J038870 Enhancer 1.2 FANTOM5 Ensembl ENCODE 11.7 -26.5 -26533 4.6 TCF12 JUND FOS REST POLR2A TRIM28 EP300 ARNT SMARCC1 SMARCC2 RF00017-4588 OSMR OSMR-AS1 LINC01265 piR-36588-346 RF00017-4587
GH05J038639 Enhancer 0.8 Ensembl ENCODE 10 +206.2 206159 2.1 NRF1 ZNF662 ZNF316 SMARCC1 SMARCC2 NFE2 JUND STAT1 RXRA HNF4A LIFR ENSG00000251189 LINC01265 piR-46002-460 LIFR-AS1
GH05J038827 Enhancer 0.7 Ensembl 10.3 +18.3 18328 1 ZSCAN5C RBAK FOS ZNF639 TRIM28 ZNF662 ZEB1 ZNF184 KLF13 KLF8 LINC01265 LOC105374733 OSMR-AS1
GH05J038884 Enhancer 0.3 Ensembl 11.9 -38.5 -38472 0.2 NR2F2 GATA2 LINC01265 OSMR OSMR-AS1 RF00017-4588 piR-36588-346 RF00017-4587
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01265 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01265 Gene

Genomic Locations for LINC01265 Gene
chr5:38,682,581-38,845,829
(GRCh38/hg38)
Size:
163,249 bases
Orientation:
Minus strand
chr5:38,710,469-38,720,375
(GRCh37/hg19)
Size:
9,907 bases
Orientation:
Minus strand

Genomic View for LINC01265 Gene

Genes around LINC01265 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01265 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01265 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01265 Gene

Proteins for LINC01265 Gene

Post-translational modifications for LINC01265 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01265 Gene

Domains & Families for LINC01265 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01265 Gene

Function for LINC01265 Gene

Phenotypes From GWAS Catalog for LINC01265 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01265 Gene

Localization for LINC01265 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01265 Gene

Pathways & Interactions for LINC01265 Gene

PathCards logo

SuperPathways for LINC01265 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01265 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01265 Gene

Drugs & Compounds for LINC01265 Gene

No Compound Related Data Available

Transcripts for LINC01265 Gene

mRNA/cDNA for LINC01265 Gene

21 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
7 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
7 NONCODE transcripts :
7 LncBook transcripts :
15 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01265 Gene

No ASD Table

Relevant External Links for LINC01265 Gene

GeneLoc Exon Structure for
LINC01265

Expression for LINC01265 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01265 Gene

genes like me logo Genes that share expression patterns with LINC01265: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01265 Gene

Orthologs for LINC01265 Gene

Evolution for LINC01265 Gene

ENSEMBL:
Gene Tree for LINC01265 (if available)
TreeFam:
Gene Tree for LINC01265 (if available)

No data available for Orthologs for LINC01265 Gene

Paralogs for LINC01265 Gene

No data available for Paralogs for LINC01265 Gene

Variants for LINC01265 Gene

Additional dbSNP identifiers (rs#s) for LINC01265 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01265 Gene

Variant ID Type Subtype PubMed ID
esv3604761 CNV gain 21293372
esv3604771 CNV gain 21293372

Additional Variant Information for LINC01265 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01265

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01265 Gene

Disorders for LINC01265 Gene

Additional Disease Information for LINC01265

No disorders were found for LINC01265 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01265 Gene

Publications for LINC01265 Gene

No publications were found for LINC01265 Gene.

No data available for Mastermind for LINC01265 Gene

Products for LINC01265 Gene

Sources for LINC01265 Gene