Aliases for LINC01264 Gene

Data sources for LINC01264 Gene:

Subcategory (RNA class) for LINC01264 Gene

lncRNA

Aliases for LINC01264 Gene

External Ids for LINC01264 Gene

Previous GeneCards Identifiers for LINC01264 Gene

  • GC00U935918

Summaries for LINC01264 Gene

GeneCards Summary for LINC01264 Gene

LINC01264 (Long Intergenic Non-Protein Coding RNA 1264) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01264 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01264 Gene

Genomics for LINC01264 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01264 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J042980 Promoter/Enhancer 1.5 VISTA EPDnew Ensembl ENCODE 250.2 +80.7 80663 1.8 HES1 BHLHE40 VEZF1 RAD51 NRF1 ZNF589 CEBPG ATF4 L3MBTL2 USF2 LINC01264 ENSG00000259869 LOC441666 LINC00839 lnc-RET-2 HSALNG0077517 lnc-RET-3 RET BMS1
GH10J043056 Enhancer 0.6 VISTA 0.7 +4.7 4740 2 RXRA RCOR1 GATA2 CHD2 SP1 HSALNG0077522 CSGALNACT2 RET LINC01264 piR-32214-054 BMS1
GH10J043042 Enhancer 0.7 Ensembl CraniofacialAtlas 0.4 +18.2 18184 2.9 ZIC2 MYC FOXA1 MAX REST CTCF GLIS1 RAD21 ZFX EP300 LINC00839 CCNYL2 ENSG00000259869 ZNF33B HSALNG0077522 LINC01264 piR-32214-054 RET BMS1
GH10J043025 Enhancer 0.8 Ensembl ENCODE 0.3 +35.2 35181 2.4 ZNF217 ELF1 MBD2 CUX1 CTBP1 MAZ NCOA3 NFIB CREB1 ZNF687 ZNF33B ENSG00000259869 piR-32214-054 HSALNG0077522 LINC01264 RET lnc-RET-3 BMS1
GH10J043064 Enhancer 0.3 Ensembl 0.7 -2.5 -2519 1 ZIC2 HSALNG0077519 CSGALNACT2 LINC01264 HSALNG0077522 RET BMS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01264 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01264 Gene

Latest Assembly
chr10:42,979,016-43,062,182
(GRCh38/hg38)
Size:
83,167 bases
Orientation:
Minus strand

Previous Assembly
chr10:43,474,465-43,476,955
(GRCh37/hg19 by Entrez Gene)
Size:
2,491 bases
Orientation:
Minus strand

chr10:43,474,465-43,476,955
(GRCh37/hg19 by Ensembl)
Size:
2,491 bases
Orientation:
Minus strand

Genomic View for LINC01264 Gene

Genes around LINC01264 on UCSC Golden Path with GeneCards custom track
LINC01264 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LINC01264 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01264 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01264 Gene

Proteins for LINC01264 Gene

Post-translational modifications for LINC01264 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01264 Gene

Domains & Families for LINC01264 Gene

Gene Families for LINC01264 Gene

genes like me logo Genes that share domains with LINC01264: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01264 Gene

Function for LINC01264 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01264 Gene

Localization for LINC01264 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01264 Gene

Pathways & Interactions for LINC01264 Gene

PathCards logo

SuperPathways for LINC01264 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01264 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01264 Gene

Drugs & Compounds for LINC01264 Gene

No Compound Related Data Available

Transcripts for LINC01264 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01264 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001CFE12_9606 lncRNA 503 5

RefSeq: NR_126352,

Ensembl: ENST00000431395 (view in UCSC) ,

LncBook: HSALNT0161787,

LNCipedia: LINC01264:1,

NONCODE: NONHSAT012937.2,

URS0001BF7B4C_9606 lncRNA 2617 1

LncBook: HSALNT0161789,

URS0001BF03C5_9606 lncRNA 1649 1

LncBook: HSALNT0161788,

URS0001BCFA1E_9606 lncRNA 500 1

LncBook: HSALNT0161787,

LINC01264 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01264 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01264 Gene

No ASD Table

Relevant External Links for LINC01264 Gene

GeneLoc Exon Structure for
LINC01264

Expression for LINC01264 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01264 Gene

genes like me logo Genes that share expression patterns with LINC01264: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01264 Gene

Orthologs for LINC01264 Gene

Evolution for LINC01264 Gene

ENSEMBL:
Gene Tree for LINC01264 (if available)
TreeFam:
Gene Tree for LINC01264 (if available)

No data available for Orthologs for LINC01264 Gene

Paralogs for LINC01264 Gene

No data available for Paralogs for LINC01264 Gene

Variants for LINC01264 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LINC01264 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for LINC01264 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01264

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01264 Gene

Disorders for LINC01264 Gene

Additional Disease Information for LINC01264

No disorders were found for LINC01264 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01264 Gene

Publications for LINC01264 Gene

  1. The role of PinX1 in growth control of breast cancer cells and its potential molecular mechanism by mRNA and lncRNA expression profiles screening. (PMID: 24672800) Shi R … Ma WL (BioMed research international 2014) 2 3

Products for LINC01264 Gene

Sources for LINC01264 Gene