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Aliases for LINC01264 Gene

Subcategory (RNA class) for LINC01264 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for LINC01264 Gene

  • Long Intergenic Non-Protein Coding RNA 1264 2 3 5
  • RP11-124O11.2 3

External Ids for LINC01264 Gene

Previous GeneCards Identifiers for LINC01264 Gene

  • GC00U935918

Summaries for LINC01264 Gene

GeneCards Summary for LINC01264 Gene

LINC01264 (Long Intergenic Non-Protein Coding RNA 1264) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01264 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01264 Gene

Genomics for LINC01264 Gene

GeneHancer (GH) Regulatory Elements for LINC01264 Gene

Promoters and enhancers for LINC01264 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J042980 Enhancer 1 VISTA ENCODE 600.7 +0.1 70 1.6 ZFX HDAC1 SOX6 CTBP1 NR2C2 RCOR1 CEBPG NRF1 BHLHE40 VEZF1 LINC01264 ENSG00000259869 ENSG00000215146 LINC00839 GC10M042909
GH10J042983 Enhancer 0.3 Ensembl 600.7 -1.9 -1894 0.8 POLR2A LINC01264 ZNF33B ENSG00000259869 MIR5100
GH10J042978 Enhancer 0.6 Ensembl 0.7 +2.3 2306 0.8 CREB1 ZNF300 ZIC2 ATF1 ATF7 TARDBP ATF2 STAT1 PAX8 TAL1 ZNF32-AS2 LINC01264 GC10M042909
GH10J042976 Enhancer 0.9 FANTOM5 Ensembl 0.4 +8.6 8606 6.2 MYC SP1 CREB1 POLR2A ZIC2 CEBPA ATF1 ZNF341 CTCF RCOR1 CSGALNACT2 ENSG00000259869 ZNF33B ENSG00000215146 LINC00839 LINC01264 GC10M042909
GH10J042951 Enhancer 1.1 VISTA ENCODE 0.3 +29.1 29116 1.6 EGR1 ZIC2 ZNF692 ZNF341 ZNF707 NFIC NR2F2 ZFP69B WT1 CTCF RET ENSG00000259869 LINC00839 ZNF33B LINC01264 GC10M042909
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01264 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01264 Gene

Genomic Locations for LINC01264 Gene
chr10:42,979,017-42,981,507
(GRCh38/hg38)
Size:
2,491 bases
Orientation:
Minus strand

Genomic View for LINC01264 Gene

Genes around LINC01264 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01264 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01264 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01264 Gene

Proteins for LINC01264 Gene

Post-translational modifications for LINC01264 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01264 Gene

Domains & Families for LINC01264 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01264 Gene

Function for LINC01264 Gene

Phenotypes From GWAS Catalog for LINC01264 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01264 Gene

Localization for LINC01264 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01264 Gene

Pathways & Interactions for LINC01264 Gene

PathCards logo

SuperPathways for LINC01264 Gene

No Data Available

Interacting Proteins for LINC01264 Gene

Gene Ontology (GO) - Biological Process for LINC01264 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01264 Gene

Drugs & Compounds for LINC01264 Gene

No Compound Related Data Available

Transcripts for LINC01264 Gene

mRNA/cDNA for LINC01264 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01264 Gene

No ASD Table

Relevant External Links for LINC01264 Gene

GeneLoc Exon Structure for
LINC01264
ECgene alternative splicing isoforms for
LINC01264

Expression for LINC01264 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01264 Gene:

LINC01264
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01264 Gene

Orthologs for LINC01264 Gene

Evolution for LINC01264 Gene

ENSEMBL:
Gene Tree for LINC01264 (if available)
TreeFam:
Gene Tree for LINC01264 (if available)

No data available for Orthologs for LINC01264 Gene

Paralogs for LINC01264 Gene

No data available for Paralogs for LINC01264 Gene

Variants for LINC01264 Gene

Sequence variations from dbSNP and Humsavar for LINC01264 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000059834 -- 42,978,637(-) C/T downstream_transcript_variant
rs1000102970 -- 42,979,474(-) T/C intron_variant
rs1000582146 -- 42,983,444(-) G/A upstream_transcript_variant
rs1001233872 -- 42,983,390(-) C/T upstream_transcript_variant
rs1001568784 -- 42,981,142(-) T/C intron_variant

Additional Variant Information for LINC01264 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01264

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01264 Gene

Disorders for LINC01264 Gene

Additional Disease Information for LINC01264

No disorders were found for LINC01264 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01264 Gene

Publications for LINC01264 Gene

  1. The role of PinX1 in growth control of breast cancer cells and its potential molecular mechanism by mRNA and lncRNA expression profiles screening. (PMID: 24672800) Shi R … Ma WL (BioMed research international 2014) 2 3 58

Products for LINC01264 Gene

Sources for LINC01264 Gene

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