Aliases for LINC01148 Gene

Subcategory (RNA class) for LINC01148 Gene

lncRNA

Number of RNA Genes sources:

1 / 14

Aliases for LINC01148 Gene

  • Long Intergenic Non-Protein Coding RNA 1148 2 3 5
  • LINC01148 2 168

External Ids for LINC01148 Gene

Previous GeneCards Identifiers for LINC01148 Gene

  • GC14P086906
  • GC14P086908

Summaries for LINC01148 Gene

GeneCards Summary for LINC01148 Gene

LINC01148 (Long Intergenic Non-Protein Coding RNA 1148) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01148 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01148 Gene

Genomics for LINC01148 Gene

GeneHancer (GH) Regulatory Elements for LINC01148 Gene

Promoters and enhancers for LINC01148 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J086892 Enhancer 0.4 Ensembl 5.7 -13.5 -13477 0.2 CREM ZGPAT NR2F6 LINC01148 piR-33410 HSALNG0102991
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01148 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01148 Gene

Genomic Locations for LINC01148 Gene
chr14:86,905,778-86,922,757
(GRCh38/hg38)
Size:
16,980 bases
Orientation:
Plus strand
chr14:87,372,122-87,389,099
(GRCh37/hg19)
Size:
16,978 bases
Orientation:
Plus strand

Genomic View for LINC01148 Gene

Genes around LINC01148 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01148 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01148 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01148 Gene

Proteins for LINC01148 Gene

Post-translational modifications for LINC01148 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01148 Gene

Domains & Families for LINC01148 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01148 Gene

Function for LINC01148 Gene

Phenotypes From GWAS Catalog for LINC01148 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01148 Gene

Localization for LINC01148 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01148 Gene

Pathways & Interactions for LINC01148 Gene

PathCards logo

SuperPathways for LINC01148 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC01148 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01148 Gene

Drugs & Compounds for LINC01148 Gene

No Compound Related Data Available

Transcripts for LINC01148 Gene

mRNA/cDNA for LINC01148 Gene

2 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01148 Gene

No ASD Table

Relevant External Links for LINC01148 Gene

GeneLoc Exon Structure for
LINC01148

Expression for LINC01148 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01148

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01148 Gene

Orthologs for LINC01148 Gene

Evolution for LINC01148 Gene

ENSEMBL:
Gene Tree for LINC01148 (if available)
TreeFam:
Gene Tree for LINC01148 (if available)

No data available for Orthologs for LINC01148 Gene

Paralogs for LINC01148 Gene

No data available for Paralogs for LINC01148 Gene

Variants for LINC01148 Gene

Additional dbSNP identifiers (rs#s) for LINC01148 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01148 Gene

Variant ID Type Subtype PubMed ID
dgv1952n100 CNV loss 25217958
esv3310097 CNV mobile element insertion 20981092
esv3398649 CNV insertion 20981092
esv3635238 CNV loss 21293372
esv3635239 CNV gain 21293372
nsv974478 CNV deletion 23825009

Additional Variant Information for LINC01148 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01148

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01148 Gene

Disorders for LINC01148 Gene

Additional Disease Information for LINC01148

No disorders were found for LINC01148 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01148 Gene

Publications for LINC01148 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for LINC01148 Gene

Sources for LINC01148 Gene