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Aliases for LINC01144 Gene

Subcategory (RNA class) for LINC01144 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for LINC01144 Gene

  • Long Intergenic Non-Protein Coding RNA 1144 2 3 5
  • TCONS_00000513 3

External Ids for LINC01144 Gene

ORGUL Members for LINC01144 Gene

Previous GeneCards Identifiers for LINC01144 Gene

  • GC01P045772

Summaries for LINC01144 Gene

GeneCards Summary for LINC01144 Gene

LINC01144 (Long Intergenic Non-Protein Coding RNA 1144) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01144 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01144 Gene

Genomics for LINC01144 Gene

GeneHancer (GH) Regulatory Elements for LINC01144 Gene

Promoters and enhancers for LINC01144 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J045302 Promoter/Enhancer 1.6 Ensembl ENCODE 600.7 +0.2 156 2.9 ZNF652 SP1 ELF3 CC2D1A CTCF ZFX MNT ZNF148 NKRF POLR2A LINC01144 LOC105378691 MUTYH ZSWIM5 CCDC163 LURAP1 ARMH1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01144 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01144 Gene

Genomic Locations for LINC01144 Gene
chr1:45,303,910-45,305,619
(GRCh38/hg38)
Size:
1,710 bases
Orientation:
Plus strand
chr1:45,769,582-45,771,291
(GRCh37/hg19)
Size:
1,710 bases
Orientation:
Plus strand

Genomic View for LINC01144 Gene

Genes around LINC01144 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01144 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01144 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01144 Gene

Proteins for LINC01144 Gene

Post-translational modifications for LINC01144 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01144 Gene

Domains & Families for LINC01144 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01144 Gene

Function for LINC01144 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01144 Gene

Localization for LINC01144 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01144 Gene

Pathways & Interactions for LINC01144 Gene

PathCards logo

SuperPathways for LINC01144 Gene

No Data Available

Interacting Proteins for LINC01144 Gene

Gene Ontology (GO) - Biological Process for LINC01144 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01144 Gene

Drugs & Compounds for LINC01144 Gene

No Compound Related Data Available

Transcripts for LINC01144 Gene

mRNA/cDNA for LINC01144 Gene

(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01144 Gene

No ASD Table

Relevant External Links for LINC01144 Gene

GeneLoc Exon Structure for
LINC01144
ECgene alternative splicing isoforms for
LINC01144

Expression for LINC01144 Gene

NURSA nuclear receptor signaling pathways regulating expression of LINC01144 Gene:

LINC01144
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01144 Gene

Orthologs for LINC01144 Gene

Evolution for LINC01144 Gene

ENSEMBL:
Gene Tree for LINC01144 (if available)
TreeFam:
Gene Tree for LINC01144 (if available)

No data available for Orthologs for LINC01144 Gene

Paralogs for LINC01144 Gene

No data available for Paralogs for LINC01144 Gene

Variants for LINC01144 Gene

Sequence variations from dbSNP and Humsavar for LINC01144 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1001024561 -- 45,305,953(+) T/C downstream_transcript_variant
rs1001474443 -- 45,303,851(+) A/C/G upstream_transcript_variant
rs1002298298 -- 45,304,409(+) A/C non_coding_transcript_variant
rs1002651027 -- 45,304,104(+) C/T non_coding_transcript_variant
rs1003615437 -- 45,305,071(+) G/A non_coding_transcript_variant

Additional Variant Information for LINC01144 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01144

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01144 Gene

Disorders for LINC01144 Gene

Additional Disease Information for LINC01144

No disorders were found for LINC01144 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01144 Gene

Publications for LINC01144 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

No data available for External Links for LINC01144 Gene

Products for LINC01144 Gene

Sources for LINC01144 Gene

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