Aliases for LINC01136 Gene

Subcategory (RNA class) for LINC01136 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for LINC01136 Gene

  • Long Intergenic Non-Protein Coding RNA 1136 2 3 5
  • LINC01136 2 170
  • HSALNG0009783 169
  • NONHSAG003991 94

External Ids for LINC01136 Gene

Summaries for LINC01136 Gene

GeneCards Summary for LINC01136 Gene

LINC01136 (Long Intergenic Non-Protein Coding RNA 1136) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC01136 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01136 Gene

Genomics for LINC01136 Gene

GeneHancer (GH) Regulatory Elements for LINC01136 Gene

Promoters and enhancers for LINC01136 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01136 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01136 Gene

Genomic Locations for LINC01136 Gene
chr1:203,279,366-203,305,325
(GRCh38/hg38)
Size:
25,960 bases
Orientation:
Minus strand
chr1:203,267,886-203,274,453
(GRCh37/hg19)
Size:
6,568 bases
Orientation:
Minus strand

Genomic View for LINC01136 Gene

Genes around LINC01136 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01136 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01136 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01136 Gene

Proteins for LINC01136 Gene

Post-translational modifications for LINC01136 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01136 Gene

Domains & Families for LINC01136 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01136 Gene

Function for LINC01136 Gene

Phenotypes From GWAS Catalog for LINC01136 Gene

Phenotypes for LINC01136 Gene

genes like me logo Genes that share phenotypes with LINC01136: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01136 Gene

Localization for LINC01136 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01136 Gene

Pathways & Interactions for LINC01136 Gene

PathCards logo

SuperPathways for LINC01136 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01136 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01136 Gene

Drugs & Compounds for LINC01136 Gene

No Compound Related Data Available

Transcripts for LINC01136 Gene

mRNA/cDNA for LINC01136 Gene

(2) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(12) RNACentral transcripts :
(7) LncBook transcripts :
(13) LNCipedia transcripts :
(3) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01136 Gene

No ASD Table

Relevant External Links for LINC01136 Gene

GeneLoc Exon Structure for
LINC01136
ECgene alternative splicing isoforms for
LINC01136

Expression for LINC01136 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01136 Gene

mRNA differential expression in normal tissues according to GTEx for LINC01136 Gene

This gene is overexpressed in Whole Blood (x11.7) and Skin - Not Sun Exposed (Suprapubic) (x6.3).

NURSA nuclear receptor signaling pathways regulating expression of LINC01136 Gene:

LINC01136
genes like me logo Genes that share expression patterns with LINC01136: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01136 Gene

Orthologs for LINC01136 Gene

Evolution for LINC01136 Gene

ENSEMBL:
Gene Tree for LINC01136 (if available)
TreeFam:
Gene Tree for LINC01136 (if available)

No data available for Orthologs for LINC01136 Gene

Paralogs for LINC01136 Gene

No data available for Paralogs for LINC01136 Gene

Variants for LINC01136 Gene

Sequence variations from dbSNP and Humsavar for LINC01136 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000200665 -- 203,305,534(-) G/A upstream_transcript_variant
rs1000664420 -- 203,301,810(-) T/A intron_variant
rs1000938390 -- 203,306,925(-) T/G upstream_transcript_variant
rs1001140251 -- 203,302,005(-) T/C/G intron_variant
rs1001236061 -- 203,304,477(-) C/T intron_variant

Additional Variant Information for LINC01136 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01136

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC01136 Gene

Disorders for LINC01136 Gene

Additional Disease Information for LINC01136

No disorders were found for LINC01136 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01136 Gene

Publications for LINC01136 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 56
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56

Products for LINC01136 Gene

Sources for LINC01136 Gene