Aliases for LINC01094 Gene

Subcategory (RNA class) for LINC01094 Gene

lncRNA

Number of RNA Genes sources:

4 / 17

Aliases for LINC01094 Gene

  • Long Intergenic Non-Protein Coding RNA 1094 2 3 5
  • LINC01094 2 5 165
  • Chronic Thromboembolic Pulmonary Hypertension RNA 2 3
  • LncRNA CTEPH-Associated 1 2 3
  • CTEPHA1 2 3
  • NONHSAG038283.2 91
  • HSALNG0035402 164

External Ids for LINC01094 Gene

Previous GeneCards Identifiers for LINC01094 Gene

  • GC04P079571

Summaries for LINC01094 Gene

GeneCards Summary for LINC01094 Gene

LINC01094 (Long Intergenic Non-Protein Coding RNA 1094) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LINC01094 include Chronic Thromboembolic Pulmonary Hypertension.

Additional gene information for LINC01094 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC01094 Gene

Genomics for LINC01094 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC01094 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC01094 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC01094 Gene

Genomic Locations for LINC01094 Gene
chr4:78,638,780-78,690,992
(GRCh38/hg38)
Size:
52,213 bases
Orientation:
Plus strand
chr4:79,567,057-79,605,655
(GRCh37/hg19)
Size:
38,599 bases
Orientation:
Plus strand

Genomic View for LINC01094 Gene

Genes around LINC01094 on UCSC Golden Path with GeneCards custom track
LINC01094 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC01094 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01094 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01094 Gene

Proteins for LINC01094 Gene

Post-translational modifications for LINC01094 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01094 Gene

Domains & Families for LINC01094 Gene

Gene Families for LINC01094 Gene

genes like me logo Genes that share domains with LINC01094: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC01094 Gene

Function for LINC01094 Gene

Phenotypes From GWAS Catalog for LINC01094 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01094 Gene

Localization for LINC01094 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01094 Gene

Pathways & Interactions for LINC01094 Gene

PathCards logo

SuperPathways for LINC01094 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC01094 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC01094 Gene

Drugs & Compounds for LINC01094 Gene

No Compound Related Data Available

Transcripts for LINC01094 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC01094 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075BC36_9606 lncRNA 4286 2

HGNC: 49219,

RefSeq: NR_038303,

URS000075B971_9606 lncRNA 4214 1

RefSeq: NR_038304,

URS000075EC60_9606 lncRNA 4192 1

RefSeq: NR_038305,

URS000075AA6B_9606 lncRNA 4120 1

RefSeq: NR_038306,

URS000075C04D_9606 lncRNA 4105 1

RefSeq: NR_038307,

LINC01094 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC01094 Gene

7 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01094 Gene

No ASD Table

Relevant External Links for LINC01094 Gene

GeneLoc Exon Structure for
LINC01094

Expression for LINC01094 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC01094 Gene

mRNA differential expression in normal tissues according to GTEx for LINC01094 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x9.6), Brain - Hypothalamus (x6.9), and Brain - Substantia nigra (x6.6).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC01094

genes like me logo Genes that share expression patterns with LINC01094: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01094 Gene

Orthologs for LINC01094 Gene

Evolution for LINC01094 Gene

ENSEMBL:
Gene Tree for LINC01094 (if available)
TreeFam:
Gene Tree for LINC01094 (if available)

No data available for Orthologs for LINC01094 Gene

Paralogs for LINC01094 Gene

No data available for Paralogs for LINC01094 Gene

Variants for LINC01094 Gene

Additional dbSNP identifiers (rs#s) for LINC01094 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC01094 Gene

Variant ID Type Subtype PubMed ID
nsv1006026 CNV loss 25217958
nsv1009633 CNV gain 25217958
nsv950058 CNV duplication 24416366

Additional Variant Information for LINC01094 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01094

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC01094 Gene

Disorders for LINC01094 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LINC01094 Gene - From: GeneCards

Disorder Aliases PubMed IDs
chronic thromboembolic pulmonary hypertension
  • cteph
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LINC01094: view

No data available for UniProtKB/Swiss-Prot and Genatlas for LINC01094 Gene

Publications for LINC01094 Gene

  1. miRNA-PDGFRB/HIF1A-lncRNA CTEPHA1 Network Plays Important Roles in the Mechanism of Chronic Thromboembolic Pulmonary Hypertension. (PMID: 31204374) Wang M … Su P (International heart journal 2019) 2 3
  2. Identification of aberrantly expressed long non-coding RNAs in postmenopausal osteoporosis. (PMID: 29568943) Fei Q … Guo A (International journal of molecular medicine 2018) 2 3
  3. FOXM1-Activated LINC01094 Promotes Clear Cell Renal Cell Carcinoma Development via MicroRNA 224-5p/CHSY1. (PMID: 31767633) Jiang Y … Gu W (Molecular and cellular biology 2020) 3
  4. Association of common variants in TNFRSF13B, TNFSF13, and ANXA3 with serum levels of non-albumin protein and immunoglobulin isotypes in Japanese. (PMID: 22558069) Osman W … Nakamura Y (PloS one 2012) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3

Products for LINC01094 Gene

Sources for LINC01094 Gene