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LINC01029 (Long Intergenic Non-Protein Coding RNA 1029) is an RNA Gene, and is affiliated with the lncRNA class.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH18J077993 | Promoter | 1 | EPDnew | 600.7 | 0.0 | -16 | 0.1 | ARHGAP35 REST HDAC1 SOX6 GTF2E2 CBX3 NKRF HMBOX1 POLR2A MTA3 | LINC01029 lnc-MBP-14 GALR1 SALL3 | |
GH18J078006 | Enhancer | 0.8 | UCNEbase Ensembl ENCODE | 0.4 | -12.6 | -12570 | 3.4 | RNF2 | RNU6-655P LINC01029 lnc-MBP-14 GALR1 SALL3 | |
GH18J077985 | Enhancer | 0.5 | UCNEbase | 0.4 | +8.0 | 7950 | 0.3 | POLR2A SUPT5H | ENSG00000264334 LOC105372218 LINC01029 GALR1 SALL3 | |
GH18J077970 | Enhancer | 0.6 | Ensembl ENCODE | 0.4 | +22.7 | 22730 | 1.2 | TEAD4 POLR2A SUPT5H | piR-48495 LINC01029 RF00994-451 GALR1 | |
GH18J078003 | Enhancer | 0.4 | Ensembl | 0.4 | -10.1 | -10070 | 0.4 | RNF2 POLR2A USF1 BMI1 | RNU6-655P LINC01029 lnc-MBP-14 GALR1 SALL3 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS0000364CA3_9606 | lncRNA | 1465 | 4 |
Ensembl: ENST00000583106 (view in UCSC) , LncBook: HSALNT0253596, LNCipedia: LINC01029:6, NONCODE: NONHSAT059996.2, |
URS0000605AE4_9606 | lncRNA | 788 | 4 |
Ensembl: ENST00000582805 (view in UCSC) , LncBook: HSALNT0253597, LNCipedia: LINC01029:2, NONCODE: NONHSAT059997.2, |
URS000075B050_9606 | lncRNA | 1313 | 3 |
HGNC: 49015, RefSeq: NR_104127, LNCipedia: LINC01029:9, |
URS000012F598_9606 | lncRNA | 1249 | 3 |
Ensembl: ENST00000577408 (view in UCSC) , LNCipedia: LINC01029:8, NONCODE: NONHSAT059994.2, |
URS0000EEFE52_9606 | lncRNA | 2052 | 1 |
Ensembl: ENST00000657337 (view in UCSC) , |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv3407n100 | CNV | gain | 25217958 |
dgv471e201 | CNV | deletion | 23290073 |
esv2717388 | CNV | deletion | 23290073 |
esv3416024 | CNV | duplication | 20981092 |
esv3643231 | CNV | loss | 21293372 |
esv3643232 | CNV | gain | 21293372 |
esv3643236 | CNV | loss | 21293372 |
nsv1072820 | CNV | deletion | 25765185 |
No disorders were found for LINC01029 Gene.
No publications were found for LINC01029 Gene.