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Aliases for LINC01014 Gene

Subcategory (RNA class) for LINC01014 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for LINC01014 Gene

  • Long Intergenic Non-Protein Coding RNA 1014 2 3 5
  • KCNMB2 Intronic Transcript 1 (Non-Protein Coding) 2 3
  • HCG1646471 3
  • KCNMB2-IT1 3

External Ids for LINC01014 Gene

Previous HGNC Symbols for LINC01014 Gene

  • KCNMB2-IT1

Previous GeneCards Identifiers for LINC01014 Gene

  • GC03P178138

Summaries for LINC01014 Gene

GeneCards Summary for LINC01014 Gene

LINC01014 (Long Intergenic Non-Protein Coding RNA 1014) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for LINC01014 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LINC01014 Gene

Genomics for LINC01014 Gene

GeneHancer (GH) Regulatory Elements for LINC01014 Gene

Promoters and enhancers for LINC01014 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I178419 Enhancer 0.3 Ensembl 550.8 -0.1 -100 0.2 JUNB ENSG00000275163 LINC01014 LOC105374235 KCNMB2
GH03I178403 Enhancer 0.2 ENCODE 6.4 -13.8 -13824 2.9 LINC01014 KCNMB2 ENSG00000275163 LOC105374235
GH03I178437 Enhancer 0.6 Ensembl 0.4 +17.9 17900 0.2 CTCF CBFB TRIM22 REST ATF2 RAD21 GATA3 SMC3 ZNF143 RUNX3 RNA5SP148 ENSG00000275163 LINC01014 PPIAP75 KCNMB2
GH03I178454 Enhancer 0.7 Ensembl ENCODE 0.3 +36.6 36629 3.2 ZNF335 ZNF687 DPF2 ZNF24 RUNX3 RNA5SP148 PPIAP75 ENSG00000275163 LINC01014 KCNMB2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LINC01014 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC01014 Gene

Genomic Locations for LINC01014 Gene
chr3:178,419,201-178,457,309
(GRCh38/hg38)
Size:
38,109 bases
Orientation:
Plus strand
chr3:178,136,989-178,175,097
(GRCh37/hg19)

Genomic View for LINC01014 Gene

Genes around LINC01014 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC01014 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC01014 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC01014 Gene

Proteins for LINC01014 Gene

Post-translational modifications for LINC01014 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC01014 Gene

Domains & Families for LINC01014 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LINC01014 Gene

Function for LINC01014 Gene

Phenotypes From GWAS Catalog for LINC01014 Gene

Phenotypes for LINC01014 Gene

GenomeRNAi human phenotypes for LINC01014:
genes like me logo Genes that share phenotypes with LINC01014: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC01014 Gene

Localization for LINC01014 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC01014 Gene

Pathways & Interactions for LINC01014 Gene

SuperPathways for LINC01014 Gene

No Data Available

Interacting Proteins for LINC01014 Gene

Gene Ontology (GO) - Biological Process for LINC01014 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LINC01014 Gene

Drugs & Compounds for LINC01014 Gene

No Compound Related Data Available

Transcripts for LINC01014 Gene

mRNA/cDNA for LINC01014 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LINC01014 Gene

No ASD Table

Relevant External Links for LINC01014 Gene

GeneLoc Exon Structure for
LINC01014
ECgene alternative splicing isoforms for
LINC01014

Expression for LINC01014 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LINC01014 Gene

mRNA differential expression in normal tissues according to GTEx for LINC01014 Gene

This gene is overexpressed in Pituitary (x13.8), Kidney - Cortex (x11.6), and Fallopian Tube (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of LINC01014 Gene:

LINC01014
genes like me logo Genes that share expression patterns with LINC01014: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC01014 Gene

Orthologs for LINC01014 Gene

Evolution for LINC01014 Gene

ENSEMBL:
Gene Tree for LINC01014 (if available)
TreeFam:
Gene Tree for LINC01014 (if available)

No data available for Orthologs for LINC01014 Gene

Paralogs for LINC01014 Gene

No data available for Paralogs for LINC01014 Gene

Variants for LINC01014 Gene

Sequence variations from dbSNP and Humsavar for LINC01014 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000006072 -- 178,419,030(+) A/G upstream_transcript_variant
rs1000013430 -- 178,432,300(+) GGGGGG/GGGGGGG intron_variant
rs1000065180 -- 178,430,549(+) G/T intron_variant
rs1000194853 -- 178,435,507(+) G/A intron_variant
rs1000307435 -- 178,426,234(+) G/C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LINC01014 Gene

Variant ID Type Subtype PubMed ID
esv2726248 CNV deletion 23290073
nsv4136 CNV deletion 18451855
nsv4137 CNV insertion 18451855
nsv476486 CNV novel sequence insertion 20440878
nsv513734 CNV insertion 21212237
nsv525869 CNV gain 19592680

Additional Variant Information for LINC01014 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC01014

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for LINC01014 Gene

Disorders for LINC01014 Gene

Additional Disease Information for LINC01014

No disorders were found for LINC01014 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC01014 Gene

Publications for LINC01014 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for LINC01014 Gene

Sources for LINC01014 Gene

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