Aliases for LINC00976 Gene

Subcategory (RNA class) for LINC00976 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for LINC00976 Gene

  • Long Intergenic Non-Protein Coding RNA 976 2 3
  • CCDC26 Long Non-Coding RNA 5
  • NONHSAG051275.2 91
  • NONHSAG051268.2 91
  • NONHSAG051270.2 91
  • HSALNG0068595 164
  • HSALNG0068556 164
  • HSALNG0068551 164
  • Lnc-GSDMC-34 165
  • Lnc-GSDMC-12 165
  • LINC00976 2
  • CCDC26 5

External Ids for LINC00976 Gene

Previous GeneCards Identifiers for LINC00976 Gene

  • GC00U936266
  • GC08M128904

Summaries for LINC00976 Gene

GeneCards Summary for LINC00976 Gene

LINC00976 (Long Intergenic Non-Protein Coding RNA 976) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LINC00976 include Loeys-Dietz Syndrome 5 and Glass Syndrome.

Additional gene information for LINC00976 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC00976 Gene

Genomics for LINC00976 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LINC00976 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC00976 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LINC00976 Gene

Genomic Locations for LINC00976 Gene
chr8:128,634,199-129,683,770
(GRCh38/hg38)
Size:
1,049,572 bases
Orientation:
Minus strand

Genomic View for LINC00976 Gene

Genes around LINC00976 on UCSC Golden Path with GeneCards custom track
LINC00976 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LINC00976 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00976 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00976 Gene

Proteins for LINC00976 Gene

Post-translational modifications for LINC00976 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00976 Gene

Domains & Families for LINC00976 Gene

Gene Families for LINC00976 Gene

genes like me logo Genes that share domains with LINC00976: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC00976 Gene

Function for LINC00976 Gene

Phenotypes From GWAS Catalog for LINC00976 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00976 Gene

Localization for LINC00976 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00976 Gene

Pathways & Interactions for LINC00976 Gene

PathCards logo

SuperPathways for LINC00976 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LINC00976 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC00976 Gene

Drugs & Compounds for LINC00976 Gene

No Compound Related Data Available

Transcripts for LINC00976 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LINC00976 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003010FF_9606 lncRNA 683 4

Ensembl: ENST00000522667 (view in UCSC) ,

LncBook: HSALNT0143997,

LNCipedia: lnc-GSDMC-34:1,

NONCODE: NONHSAT129127.2,

URS0000811958_9606 lncRNA 534 4

Ensembl: ENST00000628064 (view in UCSC) ,

LncBook: HSALNT0143911,

LNCipedia: lnc-GSDMC-34:37,

NONCODE: NONHSAT217643.1,

URS00001929EF_9606 lncRNA 1721 3

Ensembl: ENST00000446592 (view in UCSC) ,

LNCipedia: lnc-GSDMC-34:5,

NONCODE: NONHSAT129115.2,

URS000028BE82_9606 lncRNA 1496 3

Ensembl: ENST00000523151 (view in UCSC) ,

LNCipedia: lnc-GSDMC-34:16,

NONCODE: NONHSAT129114.2,

URS0000117953_9606 lncRNA 1163 3

Ensembl: ENST00000509893 (view in UCSC) ,

LNCipedia: lnc-GSDMC-34:27,

NONCODE: NONHSAT129107.2,

LINC00976 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LINC00976 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00976 Gene

No ASD Table

Relevant External Links for LINC00976 Gene

GeneLoc Exon Structure for
LINC00976

Expression for LINC00976 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00976 Gene

Orthologs for LINC00976 Gene

Evolution for LINC00976 Gene

ENSEMBL:
Gene Tree for LINC00976 (if available)
TreeFam:
Gene Tree for LINC00976 (if available)

No data available for Orthologs for LINC00976 Gene

Paralogs for LINC00976 Gene

No data available for Paralogs for LINC00976 Gene

Variants for LINC00976 Gene

Additional dbSNP identifiers (rs#s) for LINC00976 Gene

Additional Variant Information for LINC00976 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC00976

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for LINC00976 Gene

Disorders for LINC00976 Gene

MalaCards: The human disease database

(4) MalaCards diseases for LINC00976 Gene - From: DISEASES

- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for LINC00976

genes like me logo Genes that share disorders with LINC00976: view

No data available for UniProtKB/Swiss-Prot and Genatlas for LINC00976 Gene

Publications for LINC00976 Gene

  1. Long noncoding RNA 00976 promotes pancreatic cancer progression through OTUD7B by sponging miR-137 involving EGFR/MAPK pathway. (PMID: 31747939) Lei S … Jiang J (Journal of experimental & clinical cancer research : CR 2019) 3

Products for LINC00976 Gene

Sources for LINC00976 Gene