Aliases for LINC00940 Gene

Subcategory (RNA class) for LINC00940 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for LINC00940 Gene

  • Long Intergenic Non-Protein Coding RNA 940 2 3 5
  • LINC00940 2 168
  • NONHSAG010180 92

External Ids for LINC00940 Gene

Additional External Ids for LINC00940 Gene

Previous GeneCards Identifiers for LINC00940 Gene

  • GC12M002040

Summaries for LINC00940 Gene

GeneCards Summary for LINC00940 Gene

LINC00940 (Long Intergenic Non-Protein Coding RNA 940) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with LINC00940 include Retinitis Pigmentosa 3 and Retinitis Pigmentosa 11.

Additional gene information for LINC00940 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC00940 Gene

Genomics for LINC00940 Gene

GeneHancer (GH) Regulatory Elements for LINC00940 Gene

Promoters and enhancers for LINC00940 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J001935 Enhancer 1 Ensembl ENCODE dbSUPER 526.9 -0.4 -356 2.6 ZNF423 MXI1 OSR2 FOSL2 ZNF707 JUND PAX8 PKNOX1 NRF1 NFIB LINC00940 ENSG00000203593 piR-59297-100
GH12J002833 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE CraniofacialAtlas 5.6 -898.2 -898176 1.7 CTCF ZIC2 MXI1 POLR2G ZFHX2 KLF17 EGR1 GLIS1 RAD21 MAZ NRIP2 LINC00940 L13304-008 L13715-007 piR-32214-102 ITFG2
GH12J001628 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE dbSUPER 4.4 +306.5 306475 3.1 CTCF ZIC2 SAP30 EZH2 MXI1 WT1 MEF2B POLR2A TCF12 ZFHX2 WNT5B ENSG00000256706 CACNA2D4 ENSG00000250132 ERC1 RAD52 LINC00940 lnc-ADIPOR2-3 piR-32214-100
GH12J001933 Enhancer 1.1 ENCODE CraniofacialAtlas dbSUPER 0.7 +3.0 2987 0.7 USF1 SP1 ZNF341 OSR2 BCL11A TCF12 FOXA2 MEF2B ZFHX2 ZNF335 LINC00940 CACNA2D4
GH12J001939 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 -3.3 -3297 1.7 CTCF REST RAD21 TRIM22 SMC3 YY1 ATF3 WRNIP1 IKZF3 RB1 piR-59297-100 piR-56883-042 ENSG00000256706 RAD52 ENSG00000203593 LINC00940
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC00940 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC00940 Gene

Genomic Locations for LINC00940 Gene
chr12:1,929,202-1,936,576
(GRCh38/hg38)
Size:
7,375 bases
Orientation:
Minus strand
chr12:2,038,368-2,045,742
(GRCh37/hg19)
Size:
7,375 bases
Orientation:
Minus strand

Genomic View for LINC00940 Gene

Genes around LINC00940 on UCSC Golden Path with GeneCards custom track

Cytogenetic band