Aliases for LINC00881 Gene

Subcategory (RNA class) for LINC00881 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LINC00881 Gene

  • Long Intergenic Non-Protein Coding RNA 881 2 3 5
  • LINC00881 2 168
  • HSALNG0030091 167
  • NONHSAG036487 92

External Ids for LINC00881 Gene

Previous GeneCards Identifiers for LINC00881 Gene

  • GC03P156809

Summaries for LINC00881 Gene

GeneCards Summary for LINC00881 Gene

LINC00881 (Long Intergenic Non-Protein Coding RNA 881) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LINC00881 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LINC00881 Gene

Genomics for LINC00881 Gene

GeneHancer (GH) Regulatory Elements for LINC00881 Gene

Promoters and enhancers for LINC00881 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LINC00881 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LINC00881 Gene

Genomic Locations for LINC00881 Gene
chr3:157,088,806-157,135,557
(GRCh38/hg38)
Size:
46,752 bases
Orientation:
Plus strand
chr3:156,807,670-156,818,924
(GRCh37/hg19)
Size:
11,255 bases
Orientation:
Plus strand

Genomic View for LINC00881 Gene

Genes around LINC00881 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LINC00881 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LINC00881 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LINC00881 Gene

Proteins for LINC00881 Gene

Post-translational modifications for LINC00881 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LINC00881 Gene

Domains & Families for LINC00881 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LINC00881 Gene

Function for LINC00881 Gene

Phenotypes From GWAS Catalog for LINC00881 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LINC00881 Gene

Localization for LINC00881 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LINC00881 Gene

Pathways & Interactions for LINC00881 Gene

PathCards logo

SuperPathways for LINC00881 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LINC00881 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LINC00881 Gene

Drugs & Compounds for LINC00881 Gene

No Compound Related Data Available

Transcripts for LINC00881 Gene

mRNA/cDNA for LINC00881 Gene

20 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
11 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
7 NONCODE transcripts :
7 LncBook transcripts :
10 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LINC00881 Gene

No ASD Table

Relevant External Links for LINC00881 Gene

GeneLoc Exon Structure for
LINC00881

Expression for LINC00881 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LINC00881 Gene

mRNA differential expression in normal tissues according to GTEx for LINC00881 Gene

This gene is overexpressed in Heart - Left Ventricle (x28.0) and Heart - Atrial Appendage (x18.6).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LINC00881

genes like me logo Genes that share expression patterns with LINC00881: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LINC00881 Gene

Orthologs for LINC00881 Gene

Evolution for LINC00881 Gene

ENSEMBL:
Gene Tree for LINC00881 (if available)
TreeFam:
Gene Tree for LINC00881 (if available)

No data available for Orthologs for LINC00881 Gene

Paralogs for LINC00881 Gene

No data available for Paralogs for LINC00881 Gene

Variants for LINC00881 Gene

Additional dbSNP identifiers (rs#s) for LINC00881 Gene

Structural Variations from Database of Genomic Variants (DGV) for LINC00881 Gene

Variant ID Type Subtype PubMed ID
nsv829766 CNV gain 17160897

Additional Variant Information for LINC00881 Gene

Human Gene Mutation Database (HGMD)
LINC00881
SNPedia medical, phenotypic, and genealogical associations of SNPs for
LINC00881

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for LINC00881 Gene

Disorders for LINC00881 Gene

Additional Disease Information for LINC00881

No disorders were found for LINC00881 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LINC00881 Gene

Publications for LINC00881 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 54

Products for LINC00881 Gene

Sources for LINC00881 Gene